C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: queuine tRNA-ribosyltransferase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023387 Qtrtd1-001 ENSMUSG00000022704 10090 - 16:43861407-43889685 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000023387
Transcript ID Adrenal Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000023387 1.889±1.06 1.738±1.25 1.027±0.00 2.066±0.00 1.221±0.25 1.965±0.00 4.162±0.16 2.419±0.00 3.073±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CD CIL_0003CD_0002 CGP 16:43762221-43926809
CIL_0003CE CIL_0003CE_0002 CGP 16:43861407-43964314

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0008270 IEA zinc ion binding
GO:0008479 IEA queuine tRNA-ribosyltransferase activity
GO:0008616 IEA queuosine biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281273 QTRTD1-001 protein_coding Homo_sapiens 0 761
ENST00000460163 QTRTD1-006 retained_intron Homo_sapiens 0 289
ENST00000462869 QTRTD1-010 processed_transcript Homo_sapiens 0 252
ENST00000466050 QTRTD1-009 processed_transcript Homo_sapiens 0 287
ENST00000466870 QTRTD1-011 retained_intron Homo_sapiens 0 279
ENST00000467703 QTRTD1-015 retained_intron Homo_sapiens 0 228
ENST00000472599 QTRTD1-005 protein_coding Homo_sapiens 0 381
ENST00000479882 QTRTD1-003 protein_coding Homo_sapiens 0 761
ENST00000482307 QTRTD1-016 protein_coding Homo_sapiens 0 514
ENST00000485050 QTRTD1-002 protein_coding Homo_sapiens 0 761
ENST00000490183 QTRTD1-008 retained_intron Homo_sapiens 0 289
ENST00000493014 QTRTD1-004 protein_coding Homo_sapiens 0 761

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