C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003D9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000213714-ENSG00000087510 CGP 9606 20:56533246-56639283
GeneTranscriptPositionBiotype
ENSG00000087510 (TFAP2C)
transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) 		ENST00000201031 (TFAP2C-001) 56629302-56639283 protein_coding
ENST00000416606 (TFAP2C-002) 56630234-56631547 protein_coding
ENSG00000213714 (FAM209B)
family with sequence similarity 209, member B 		ENST00000371325 (FAM209B-001) 56533246-56536520 protein_coding
ENSG00000214541 (RPS4XP3)
ribosomal protein S4X pseudogene 3 		ENST00000398541 (RPS4XP3-001) 56601701-56602113 processed_pseudogene
ENSG00000225657 (RP5-843L14.1)
 ENST00000434176 (RP5-843L14.1-001) 56577563-56596126 lincRNA
ENST00000437350 (RP5-843L14.1-002) 56596310-56598621 lincRNA
CIL_0003D9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027505-ENSMUSG00000028640 CGP 10090 2:172472520-172558622
GeneTranscriptPositionBiotype
ENSMUSG00000027505 (Fam209)
family with sequence similarity 209 		ENSMUST00000029007 (Fam209-001) 172472520-172474331 protein_coding
ENSMUSG00000028640 (Tfap2c)
transcription factor AP-2, gamma 		ENSMUST00000030391 (Tfap2c-001) 172549593-172558622 protein_coding
ENSMUST00000099058 (Tfap2c-004) 172550782-172558619 protein_coding
ENSMUST00000122982 (Tfap2c-003) 172550764-172557826 processed_transcript
ENSMUST00000128406 (Tfap2c-002) 172550653-172558607 processed_transcript
ENSMUST00000142633 (Tfap2c-005) 172552116-172553518 processed_transcript
ENSMUST00000170744 (Tfap2c-201) 172550991-172558619 protein_coding
ENSMUSG00000081344 (Gm14303)
predicted gene 14303 		ENSMUST00000121320 (Gm14303-001) 172509521-172509691 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003D9_0001ENSG00000087510ENST00000201031ENST00000416606ENSG00000213714ENST00000371325ENSG00000214541ENST00000398541ENSG00000225657ENST00000434176ENST00000437350CIL_0003D9_0002ENSMUSG00000027505ENSMUST00000029007ENSMUSG00000028640ENSMUST00000030391ENSMUST00000099058ENSMUST00000122982ENSMUST00000128406ENSMUST00000142633ENSMUST00000170744ENSMUSG00000081344ENSMUST00000121320
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003D9_0001ENSG00000087510ENST00000201031ENSG00000213714ENST00000371325ENSG00000214541ENST00000398541ENSG00000225657ENST00000434176CIL_0003D9_0002ENSMUSG00000027505ENSMUST00000029007ENSMUSG00000028640ENSMUST00000030391ENSMUST00000099058ENSMUST00000122982ENSMUST00000128406ENSMUST00000170744ENSMUSG00000081344ENSMUST00000121320
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000087510 ENST00000201031 0.310±0.00 N/A 0.062±0.00 0.030±0.00 5.453±4.44 0.678±0.00 0.096±0.00 0.498±0.40 0.182±0.18 0.840±0.68 N/A 1.004±0.67 13.245±3.45 1.122±0.00
ENST00000416606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213714 ENST00000371325 0.174±0.00 0.566±0.00 N/A 0.220±0.00 0.160±0.00 N/A 0.184±0.00 0.457±0.00 0.040±0.00 0.126±0.00 N/A 0.172±0.06 0.047±0.00 28.367±12.04
ENSG00000214541 ENST00000398541 0.171±0.00 N/A N/A 0.036±0.00 0.107±0.00 N/A N/A 0.070±0.00 N/A N/A 0.060±0.00 0.072±0.00 N/A 0.095±0.00
ENSG00000225657 ENST00000434176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.065±0.00
ENST00000437350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027505 ENSMUST00000029007 N/A 0.314±0.18 N/A 0.235±0.00 0.337±0.13 0.231±0.14 0.120±0.00 0.171±0.03 0.125±0.04 0.185±0.09 0.091±0.04 0.265±0.11 0.434±0.16 215.017±43.68
ENSMUSG00000028640 ENSMUST00000030391 0.374±0.08 N/A 1.807±0.22 3.057±1.87 2.760±0.99 N/A N/A N/A 0.024±0.00 0.207±0.03 0.031±0.00 0.417±0.27 30.486±11.80 0.069±0.03
ENSMUST00000099058 0.140±0.00 N/A 0.766±0.00 0.501±0.00 0.903±0.15 N/A N/A N/A N/A 0.067±0.03 N/A 0.459±0.06 6.938±1.09 0.033±0.00
ENSMUST00000122982 N/A N/A N/A N/A 0.511±0.00 N/A N/A 0.024±0.01 N/A 0.061±0.04 N/A 0.030±0.00 21.320±0.00 0.039±0.00
ENSMUST00000128406 N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A 0.014±0.01 0.135±0.07 N/A N/A
ENSMUST00000142633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170744 N/A N/A N/A 0.026±0.00 0.937±0.00 N/A N/A N/A 0.012±0.00 N/A 0.022±0.01 0.427±0.20 N/A 0.048±0.00
ENSMUSG00000081344 ENSMUST00000121320 N/A N/A N/A 12.966±0.00 N/A N/A N/A N/A 40.269±0.00 N/A N/A N/A N/A N/A

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