C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003EY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000181061-ENSG00000144648 CGP 9606 3:42757177-42887974
GeneTranscriptPositionBiotype
ENSG00000144648 (ACKR2)
atypical chemokine receptor 2 		ENST00000273145 (ACKR2-201) 42819619-42867282 protein_coding
ENST00000422265 (ACKR2-001) 42809476-42867283 protein_coding
ENST00000442925 (ACKR2-003) 42809472-42867283 protein_coding
ENST00000460855 (ACKR2-015) 42809456-42887640 processed_transcript
ENST00000463699 (ACKR2-006) 42809430-42864534 processed_transcript
ENST00000480215 (ACKR2-010) 42809476-42843987 processed_transcript
ENST00000492609 (ACKR2-011) 42843964-42864930 protein_coding
ENST00000493193 (ACKR2-013) 42856037-42865201 protein_coding
ENST00000494619 (ACKR2-012) 42850966-42865013 protein_coding
ENST00000497921 (ACKR2-007) 42809492-42864876 protein_coding
ENST00000498111 (ACKR2-002) 42809462-42887974 processed_transcript
ENST00000565749 (ACKR2-016) 42804752-42835773 processed_transcript
ENSG00000180432 (CYP8B1)
cytochrome P450, family 8, subfamily B, polypeptide 1 		ENST00000316161 (CYP8B1-001) 42872192-42876165 protein_coding
ENST00000437102 (CYP8B1-002) 42856005-42875898 protein_coding
ENSG00000181061 (HIGD1A)
HIG1 hypoxia inducible domain family, member 1A 		ENST00000321331 (HIGD1A-001) 42784298-42804531 protein_coding
ENST00000418900 (HIGD1A-002) 42784330-42804488 protein_coding
ENST00000430190 (HIGD1A-005) 42784905-42804490 protein_coding
ENST00000431549 (HIGD1A-007) 42757177-42804518 nonsense_mediated_decay
ENST00000452906 (HIGD1A-006) 42785252-42804433 protein_coding
ENST00000470543 (HIGD1A-004) 42784526-42804488 processed_transcript
ENSG00000240747 (KRBOX1)
KRAB box domain containing 1 		ENST00000383748 (KRBOX1-001) 42936360-42942792 protein_coding
ENST00000418176 (KRBOX1-003) 42936862-42942792 protein_coding
ENST00000426937 (KRBOX1-008) 42809483-42942792 protein_coding
ENST00000463888 (KRBOX1-009) 42941193-42942789 retained_intron
ENSG00000244607 (CCDC13)
coiled-coil domain containing 13 		ENST00000310232 (CCDC13-001) 42708269-42773253 protein_coding
ENST00000435327 (CCDC13-003) 42749815-42773243 processed_transcript
ENST00000466031 (CCDC13-004) 42709698-42714149 processed_transcript
ENST00000472921 (CCDC13-005) 42713162-42733544 processed_transcript
ENST00000479576 (CCDC13-007) 42745735-42757120 retained_intron
ENST00000479631 (CCDC13-009) 42692663-42714126 processed_transcript
ENST00000482100 (CCDC13-006) 42717968-42719525 processed_transcript
ENST00000492806 (CCDC13-002) 42746794-42773253 retained_intron
ENST00000496027 (CCDC13-008) 42698708-42732922 processed_transcript
ENSG00000273291 (RP11-136C24.3)
Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000477043} 		ENST00000418093 (RP11-136C24.3-003) 42936342-43032547 processed_transcript
ENST00000443313 (RP11-136C24.3-002) 42936392-43055871 nonsense_mediated_decay
ENST00000446977 (RP11-136C24.3-004) 42936859-43032292 protein_coding
ENST00000451200 (RP11-136C24.3-001) 42809446-43032335 processed_transcript
ENSG00000273328 (RP11-141M3.6)
 ENST00000471537 (RP11-141M3.6-003) 42809472-42900336 processed_transcript
ENST00000487368 (RP11-141M3.6-001) 42809445-42908105 processed_transcript
ENST00000496604 (RP11-141M3.6-002) 42809414-42897324 processed_transcript
CIL_0003EY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038412-ENSMUSG00000044534 CGP 10090 9:121848560-121911064
GeneTranscriptPositionBiotype
ENSMUSG00000038412 (Higd1a)
HIG1 domain family, member 1A 		ENSMUST00000060251 (Higd1a-201) 121848560-121858000 protein_coding
ENSMUSG00000044534 (Ackr2)
atypical chemokine receptor 2 		ENSMUST00000050327 (Ackr2-201) 121898464-121911064 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EY_0001ENSG00000144648ENST00000273145ENST00000422265ENST00000442925ENST00000460855ENST00000463699ENST00000480215ENST00000492609ENST00000493193ENST00000494619ENST00000497921ENST00000498111ENST00000565749ENSG00000180432ENST00000316161ENST00000437102ENSG00000181061ENST00000321331ENST00000418900ENST00000430190ENST00000431549ENST00000452906ENST00000470543ENSG00000240747ENST00000383748ENST00000418176ENST00000426937ENST00000463888ENSG00000244607ENST00000310232ENST00000435327ENST00000466031ENST00000472921ENST00000479576ENST00000479631ENST00000482100ENST00000492806ENST00000496027ENSG00000273291ENST00000418093ENST00000443313ENST00000446977ENST00000451200ENSG00000273328ENST00000471537ENST00000487368ENST00000496604CIL_0003EY_0002ENSMUSG00000038412ENSMUST00000060251ENSMUSG00000044534ENSMUST00000050327
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EY_0001ENSG00000144648ENST00000273145ENST00000442925ENST00000492609ENSG00000180432ENST00000316161ENSG00000181061ENST00000321331ENST00000418900ENST00000430190ENST00000452906ENSG00000240747ENST00000383748ENST00000463888ENSG00000244607ENST00000310232ENST00000482100ENSG00000273291ENST00000418093ENSG00000273328ENST00000471537CIL_0003EY_0002ENSMUSG00000038412ENSMUST00000060251ENSMUSG00000044534ENSMUST00000050327
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144648 ENST00000273145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.180±0.00 N/A
ENST00000422265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442925 3.521±0.00 N/A N/A N/A N/A N/A 0.515±0.00 N/A N/A 1.123±0.00 0.147±0.07 N/A 11.143±0.00 N/A
ENST00000460855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492609 N/A N/A N/A N/A 8.454±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180432 ENST00000316161 N/A N/A 1.068±0.00 N/A N/A N/A 0.336±0.00 23.024±15.93 111.208±0.00 N/A N/A N/A 5.774±0.00 N/A
ENST00000437102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000181061 ENST00000321331 40.058±0.00 35.758±0.00 10.327±0.00 99.094±40.51 43.578±19.68 44.600±6.70 69.200±44.16 66.622±34.55 61.290±46.37 27.565±13.77 13.298±6.76 21.870±11.03 29.300±1.88 40.567±19.99
ENST00000418900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.351±0.00 41.939±0.00 12.898±0.00
ENST00000430190 N/A N/A 5.620±0.00 N/A N/A N/A 20.026±0.00 N/A 8.125±0.00 N/A N/A 26.055±0.00 N/A 41.144±0.00
ENST00000431549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452906 N/A N/A 5.913±0.00 N/A N/A 14.272±0.00 N/A N/A N/A N/A 22.727±0.00 24.666±16.70 N/A 28.268±0.00
ENST00000470543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240747 ENST00000383748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.768±0.00
ENST00000418176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.330±0.00 N/A N/A 44.317±1.16
ENSG00000244607 ENST00000310232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.677±0.00
ENST00000435327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482100 0.023±0.00 0.145±0.00 N/A 0.183±0.00 0.073±0.00 N/A 0.207±0.00 0.025±0.00 N/A 0.244±0.00 0.150±0.00 0.197±0.17 N/A 0.212±0.07
ENST00000492806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273291 ENST00000418093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.159±0.00
ENST00000443313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273328 ENST00000471537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.742±0.00 N/A
ENST00000487368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038412 ENSMUST00000060251 12.363±2.30 15.030±2.94 19.858±2.43 15.610±1.99 8.951±1.16 23.444±3.65 25.594±3.35 12.307±1.10 11.271±4.77 10.605±0.89 25.392±1.56 9.513±1.71 11.806±4.21 15.413±4.83
ENSMUSG00000044534 ENSMUST00000050327 1.231±0.38 0.473±0.11 2.471±0.40 0.184±0.03 4.254±1.55 0.676±0.40 0.789±0.29 0.418±0.04 0.541±0.33 15.926±7.59 0.241±0.10 1.057±0.47 2.342±1.57 0.177±0.09

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