C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ras homolog family member T2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000561929 RHOT2-014 ENSG00000140983 9606 + 16:668209-670940 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLungOvaryTestisENST00000561929
Transcript ID Colon Lung Ovary Testis
ENST00000561929 2.238±0.00 1.094±0.00 15.786±0.00 23.441±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GL CIL_0003GL_0002 CGP 16:649311-674174
CIL_0003GN CIL_0003GN_0001 CGP 16:668086-678268

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0031307 IEA integral component of mitochondrial outer membrane
GO:0047497 IEA mitochondrion transport along microtubule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176247 Rhot2-004 retained_intron Mus_musculus 0 278
ENSMUST00000177347 Rhot2-006 retained_intron Mus_musculus 0 278
ENSMUST00000043897 Rhot2-001 protein_coding Mus_musculus 0 278
ENSMUST00000176591 Rhot2-015 protein_coding Mus_musculus 0 270
ENSMUST00000176709 Rhot2-016 protein_coding Mus_musculus 0 257
ENSMUST00000177470 Rhot2-002 retained_intron Mus_musculus 1e-25 121

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