C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003IA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000145990-ENSG00000124523 CGP 9606 6:13357830-13615158
GeneTranscriptPositionBiotype
ENSG00000124523 (SIRT5)
sirtuin 5 		ENST00000359782 (SIRT5-003) 13574594-13612289 protein_coding
ENST00000379250 (SIRT5-004) 13574584-13612173 nonsense_mediated_decay
ENST00000379262 (SIRT5-001) 13574601-13605739 protein_coding
ENST00000397350 (SIRT5-201) 13574529-13615158 protein_coding
ENST00000606117 (SIRT5-002) 13574643-13614558 protein_coding
ENST00000606427 (SIRT5-005) 13574599-13588425 nonsense_mediated_decay
ENSG00000145990 (GFOD1)
glucose-fructose oxidoreductase domain containing 1 		ENST00000379278 (GFOD1-003) 13469275-13486183 processed_transcript
ENST00000379284 (GFOD1-002) 13357830-13408137 protein_coding
ENST00000379287 (GFOD1-001) 13357830-13487555 protein_coding
ENST00000603223 (GFOD1-004) 13469268-13487662 protein_coding
ENST00000605067 (GFOD1-005) 13469268-13472044 processed_transcript
ENST00000612338 (GFOD1-201) 13363355-13486183 protein_coding
ENSG00000218265 (RPS4XP7)
ribosomal protein S4X pseudogene 7 		ENST00000406274 (RPS4XP7-001) 13521266-13522045 processed_pseudogene
ENSG00000261071 (RP1-223E5.4)
 ENST00000566170 (RP1-223E5.4-001) 13614111-13615155 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0003IA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051335-ENSMUSG00000054021 CGP 10090 13:43195519-43395202
GeneTranscriptPositionBiotype
ENSMUSG00000051335 (Gfod1)
glucose-fructose oxidoreductase domain containing 1 		ENSMUST00000055341 (Gfod1-201) 43195519-43304172 protein_coding
ENSMUSG00000054021 (Sirt5)
sirtuin 5 		ENSMUST00000066804 (Sirt5-201) 43370710-43395202 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003IA_0001ENSG00000124523ENST00000359782ENST00000379250ENST00000379262ENST00000397350ENST00000606117ENST00000606427ENSG00000145990ENST00000379278ENST00000379284ENST00000379287ENST00000603223ENST00000605067ENST00000612338ENSG00000218265ENST00000406274ENSG00000261071ENST00000566170CIL_0003IA_0002ENSMUSG00000051335ENSMUST00000055341ENSMUSG00000054021ENSMUST00000066804
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003IA_0001ENSG00000124523ENST00000359782ENST00000379250ENST00000379262ENST00000606117ENST00000606427ENSG00000145990ENST00000379278ENST00000379284ENST00000379287ENST00000603223ENST00000605067ENSG00000218265ENST00000406274ENSG00000261071ENST00000566170CIL_0003IA_0002ENSMUSG00000051335ENSMUST00000055341ENSMUSG00000054021ENSMUST00000066804
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124523 ENST00000359782 1.311±0.00 N/A N/A 2.751±0.00 1.581±0.26 2.641±0.00 3.632±1.44 4.822±2.58 0.933±0.00 0.767±0.07 5.382±0.00 2.792±0.80 1.790±0.63 2.418±0.00
ENST00000379250 2.188±0.00 1.045±0.00 0.835±0.00 3.782±0.19 1.534±0.41 4.061±0.00 4.525±1.26 5.254±0.00 3.579±1.98 1.785±0.00 2.079±0.00 3.907±1.49 2.578±0.35 3.875±0.54
ENST00000379262 N/A 0.815±0.00 N/A N/A N/A N/A N/A N/A 1.145±0.00 0.346±0.00 N/A 0.936±0.35 0.612±0.00 1.316±0.00
ENST00000397350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606117 1.473±0.00 0.764±0.00 0.732±0.00 2.018±0.58 0.994±0.11 0.692±0.01 1.558±0.00 1.561±0.61 1.181±0.11 0.293±0.08 1.515±0.07 2.021±0.84 0.796±0.29 1.408±0.00
ENST00000606427 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.052±0.00 N/A N/A N/A N/A
ENSG00000145990 ENST00000379278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.208±0.00
ENST00000379284 N/A N/A N/A N/A 0.894±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379287 14.086±0.00 2.464±0.00 0.238±0.00 6.462±1.41 2.799±1.06 1.605±1.37 5.097±3.29 1.296±0.55 1.646±0.25 2.297±0.72 4.316±2.56 0.527±0.21 1.398±0.29 0.561±0.45
ENST00000603223 N/A N/A N/A N/A N/A 0.646±0.00 1.179±0.00 N/A N/A N/A N/A 0.309±0.00 1.037±0.00 0.246±0.00
ENST00000605067 N/A N/A 0.727±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.422±0.00 N/A N/A
ENST00000612338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000218265 ENST00000406274 0.145±0.00 0.051±0.00 0.475±0.00 0.046±0.01 0.177±0.08 0.300±0.25 0.052±0.02 0.099±0.00 N/A 0.015±0.00 0.014±0.00 N/A N/A N/A
ENSG00000261071 ENST00000566170 N/A 2.731±0.00 1.308±0.00 4.872±0.00 N/A N/A N/A N/A N/A N/A 2.335±0.00 N/A N/A 7.525±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000051335 ENSMUST00000055341 4.181±1.47 2.433±0.25 1.745±0.16 4.344±2.46 3.425±0.59 1.413±0.08 6.265±0.84 0.968±0.10 0.531±0.21 7.951±0.68 0.845±0.17 2.756±0.75 2.342±1.45 0.124±0.06
ENSMUSG00000054021 ENSMUST00000066804 N/A 3.845±1.97 3.387±0.11 7.626±7.40 1.600±0.68 3.793±1.30 3.473±1.25 2.753±1.20 2.408±1.71 1.995±1.59 2.830±1.35 4.453±1.94 1.811±0.31 1.132±0.34

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