C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S4X pseudogene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406274 RPS4XP7-001 ENSG00000218265 9606 + 6:13521266-13522045 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleENST00000406274
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle
ENST00000406274 0.145±0.00 0.051±0.00 0.475±0.00 0.046±0.01 0.177±0.08 0.300±0.25 0.052±0.02 0.099±0.00 0.015±0.00 0.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MO CIL_0008MO_0001 VISTA 6:13058507-13660102
CIL_0003IA CIL_0003IA_0001 CGP 6:13357830-13615158

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033683 Rps4x-001 protein_coding Mus_musculus 0 878
ENSMUST00000165198 Gm9294-001 processed_pseudogene Mus_musculus 0 813
ENSMUST00000119478 Gm12852-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000121609 Gm12267-001 processed_pseudogene Mus_musculus 0 505

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