C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, ubiquitous
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021142 Atp2a3-201 ENSMUSG00000020788 10090 + 11:72961169-72993043 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021142
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021142 21.652±3.87 4.381±0.92 10.870±2.88 0.860±0.62 21.376±9.80 246.939±26.02 4.163±1.63 9.653±0.77 3.048±2.40 106.412±9.56 1.580±0.60 8.384±4.25 5.018±3.69 0.681±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KA CIL_0003KA_0002 CGP 11:72796226-72993044

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016529 IEA sarcoplasmic reticulum
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000146241 atp2a2a-003 protein_coding Danio_rerio 0 1162
ENSDART00000042040 atp2a2a-001 protein_coding Danio_rerio 0 1162
ENST00000309890 ATP2A3-201 protein_coding Homo_sapiens 0 3677
ENST00000352011 ATP2A3-015 protein_coding Homo_sapiens 0 3672
ENST00000357084 ATP2A1-001 protein_coding Homo_sapiens 0 1445
ENST00000359983 ATP2A3-005 protein_coding Homo_sapiens 0 3618
ENST00000395503 ATP2A1-002 protein_coding Homo_sapiens 0 1445
ENST00000397035 ATP2A3-004 protein_coding Homo_sapiens 0 3648
ENST00000397041 ATP2A3-001 protein_coding Homo_sapiens 0 3648
ENST00000397043 ATP2A3-002 protein_coding Homo_sapiens 0 3648
ENST00000536376 ATP2A1-003 protein_coding Homo_sapiens 0 1351
ENST00000576957 ATP2A3-012 retained_intron Homo_sapiens 0 647

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