C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, ubiquitous
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108485 Atp2a3-202 ENSMUSG00000020788 10090 + 11:72961169-72993043 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000108485
Transcript ID Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000108485 0.395±0.25 8.937±3.22 98.942±23.05 1.810±0.00 1.593±0.72 0.744±0.27 2.054±0.92 3.205±1.48 0.430±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KA CIL_0003KA_0002 CGP 11:72796226-72993044

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000146241 atp2a2a-003 protein_coding Danio_rerio 0 1162
ENSDART00000042040 atp2a2a-001 protein_coding Danio_rerio 0 1162
ENST00000309890 ATP2A3-201 protein_coding Homo_sapiens 0 3677
ENST00000352011 ATP2A3-015 protein_coding Homo_sapiens 0 3648
ENST00000357084 ATP2A1-001 protein_coding Homo_sapiens 0 1445
ENST00000359983 ATP2A3-005 protein_coding Homo_sapiens 0 3618
ENST00000395503 ATP2A1-002 protein_coding Homo_sapiens 0 1445
ENST00000397035 ATP2A3-004 protein_coding Homo_sapiens 0 3648
ENST00000397041 ATP2A3-001 protein_coding Homo_sapiens 0 3685
ENST00000397043 ATP2A3-002 protein_coding Homo_sapiens 0 3675
ENST00000536376 ATP2A1-003 protein_coding Homo_sapiens 0 1351
ENST00000576957 ATP2A3-012 retained_intron Homo_sapiens 0 647

Loading