C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003LA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163645-ENSG00000181788 CGP 9606 3:150659885-150763477
GeneTranscriptPositionBiotype
ENSG00000163645 (ERICH6)
glutamate-rich 6 		ENST00000295910 (ERICH6-001) 150659885-150703951 protein_coding
ENST00000474463 (ERICH6-006) 150686338-150703932 protein_coding
ENST00000491361 (ERICH6-002) 150659885-150703958 protein_coding
ENST00000491716 (ERICH6-004) 150659885-150682319 retained_intron
ENST00000498386 (ERICH6-005) 150698818-150703971 protein_coding
ENSG00000181788 (SIAH2)
siah E3 ubiquitin protein ligase 2 		ENST00000312960 (SIAH2-001) 150741127-150763377 protein_coding
ENST00000472885 (SIAH2-002) 150762456-150763477 processed_transcript
ENST00000482706 (SIAH2-003) 150742488-150763431 protein_coding
ENSG00000244668 (SNRPCP3)
small nuclear ribonucleoprotein polypeptide C pseudogene 3 		ENST00000474888 (SNRPCP3-001) 150719997-150720836 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0003LA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070471-ENSMUSG00000036432 CGP 10090 3:58616300-58692400
GeneTranscriptPositionBiotype
ENSMUSG00000036432 (Siah2)
seven in absentia 2 		ENSMUST00000070368 (Siah2-001) 58674938-58692400 protein_coding
ENSMUST00000145032 (Siah2-002) 58676176-58686037 processed_transcript
ENSMUSG00000070471 (Erich6)
glutamate rich 6 		ENSMUST00000041115 (Erich6-201) 58616300-58637207 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LA_0001ENSG00000163645ENST00000295910ENST00000474463ENST00000491361ENST00000491716ENST00000498386ENSG00000181788ENST00000312960ENST00000472885ENST00000482706ENSG00000244668ENST00000474888CIL_0003LA_0002ENSMUSG00000036432ENSMUST00000070368ENSMUST00000145032ENSMUSG00000070471ENSMUST00000041115
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LA_0001ENSG00000163645ENST00000295910ENST00000491361ENST00000491716ENST00000498386ENSG00000181788ENST00000312960ENSG00000244668ENST00000474888CIL_0003LA_0002ENSMUSG00000036432ENSMUST00000070368ENSMUST00000145032ENSMUSG00000070471ENSMUST00000041115
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163645 ENST00000295910 N/A N/A N/A 0.052±0.00 N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A 9.423±0.00
ENST00000474463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491361 N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A 15.761±0.00
ENST00000491716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.544±0.00
ENST00000498386 0.212±0.00 N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A 0.057±0.00 N/A
ENSG00000181788 ENST00000312960 5.954±0.00 2.356±0.00 N/A 2.638±0.81 1.851±1.12 3.466±1.31 3.392±2.24 10.041±0.43 5.536±4.29 8.307±6.85 2.896±2.29 9.113±8.01 7.076±1.33 5.242±1.59
ENST00000472885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000244668 ENST00000474888 0.294±0.00 1.135±0.00 N/A N/A 0.277±0.00 0.359±0.00 N/A N/A 0.328±0.00 N/A N/A 0.387±0.12 0.478±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036432 ENSMUST00000070368 4.808±1.43 18.066±3.91 4.910±0.35 4.270±1.45 9.045±2.01 9.537±0.86 4.285±0.20 9.826±0.48 8.799±3.25 7.136±0.48 3.108±0.84 14.329±6.41 4.175±1.34 53.601±23.73
ENSMUST00000145032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.147±0.00
ENSMUSG00000070471 ENSMUST00000041115 0.089±0.06 0.076±0.03 0.039±0.02 0.270±0.00 0.063±0.01 0.054±0.01 0.081±0.05 0.074±0.03 0.019±0.01 0.105±0.08 0.018±0.00 0.276±0.18 0.021±0.01 23.703±7.94

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