C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein polypeptide C pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000474888 SNRPCP3-001 ENSG00000244668 9606 - 3:150719997-150720836 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverOvaryPlacentaENST00000474888
Transcript ID Adipose Adrenal Breast Colon Liver Ovary Placenta
ENST00000474888 0.294±0.00 1.135±0.00 0.277±0.00 0.359±0.00 0.328±0.00 0.387±0.12 0.478±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LA CIL_0003LA_0001 CGP 3:150659885-150763477

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071006 Snrpc-001 protein_coding Mus_musculus 0 374
ENSMUST00000058951 Gm8849-201 pseudogene Mus_musculus 0 342
ENSMUST00000137581 Snrpc-002 retained_intron Mus_musculus 0 259
ENSMUST00000121668 Gm13555-001 processed_pseudogene Mus_musculus 4.06377e-44 182

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