C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003PW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000011222-ENSDARG00000092483 CGP 7955 13:33505697-33525588
GeneTranscriptPositionBiotype
ENSDARG00000011222 (ccdc28b)
coiled-coil domain containing 28B 		ENSDART00000021382 (ccdc28b-201) 33510446-33517102 protein_coding
ENSDART00000135200 (ccdc28b-001) 33505697-33517256 protein_coding
ENSDARG00000092483 (iqcc)
IQ motif containing C 		ENSDART00000131892 (iqcc-001) 33521940-33525588 protein_coding
ENSDART00000143895 (iqcc-002) 33521998-33524516 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003PW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160050-ENSG00000160051 CGP 9606 1:32200386-32208687
GeneTranscriptPositionBiotype
ENSG00000160050 (CCDC28B)
coiled-coil domain containing 28B 		ENST00000373602 (CCDC28B-002) 32200386-32205387 protein_coding
ENST00000421922 (CCDC28B-001) 32200633-32205387 protein_coding
ENST00000461819 (CCDC28B-005) 32200644-32205383 nonsense_mediated_decay
ENST00000469003 (CCDC28B-003) 32200601-32203159 nonsense_mediated_decay
ENST00000483009 (CCDC28B-004) 32201696-32205214 processed_transcript
ENSG00000160051 (IQCC)
IQ motif containing C 		ENST00000291358 (IQCC-001) 32205661-32208687 protein_coding
ENST00000537469 (IQCC-002) 32205671-32208682 protein_coding
ENST00000617816 (IQCC-003) 32205671-32208548 retained_intron
ENSG00000224066 (RP4-622L5.7)
 ENST00000373604 (RP4-622L5.7-002) 32204769-32206185 antisense
ENST00000421616 (RP4-622L5.7-001) 32205498-32206814 antisense

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PW_0001ENSDARG00000011222ENSDART00000021382ENSDART00000135200ENSDARG00000092483ENSDART00000131892ENSDART00000143895CIL_0003PW_0002ENSG00000160050ENST00000373602ENST00000421922ENST00000461819ENST00000469003ENST00000483009ENSG00000160051ENST00000291358ENST00000537469ENST00000617816ENSG00000224066ENST00000373604ENST00000421616
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PW_0001ENSDARG00000011222ENSDART00000021382ENSDART00000135200ENSDARG00000092483ENSDART00000131892ENSDART00000143895CIL_0003PW_0002ENSG00000160050ENST00000373602ENST00000421922ENST00000461819ENST00000483009ENSG00000160051ENST00000291358ENST00000537469ENST00000617816ENSG00000224066ENST00000373604
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000011222 ENSDART00000021382 N/A N/A N/A 1.446±0.00 N/A N/A 1.356±0.00 0.443±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000135200 N/A N/A N/A N/A N/A N/A 2.083±0.50 0.593±0.00 0.128±0.00 N/A 0.507±0.00 N/A N/A N/A
ENSDARG00000092483 ENSDART00000131892 N/A N/A N/A 1.027±0.82 N/A N/A 0.615±0.13 2.572±1.22 0.222±0.00 N/A N/A N/A N/A N/A
ENSDART00000143895 N/A N/A N/A 0.764±0.00 N/A N/A 0.255±0.00 N/A 0.073±0.00 N/A 0.182±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160050 ENST00000373602 N/A N/A N/A 2.369±0.00 0.340±0.00 0.659±0.00 1.660±0.40 N/A N/A 1.919±0.00 2.429±1.20 5.081±1.11 3.530±1.47 16.039±0.00
ENST00000421922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.398±0.00 N/A N/A N/A
ENST00000461819 1.892±0.00 6.752±0.00 N/A 5.471±0.00 7.605±0.00 3.213±2.50 2.156±0.00 3.238±0.00 N/A 2.317±0.00 7.513±0.00 4.170±1.05 2.791±0.78 19.859±0.00
ENST00000469003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483009 N/A N/A N/A N/A N/A N/A N/A N/A 0.304±0.00 1.113±0.00 N/A N/A 2.552±0.00 N/A
ENSG00000160051 ENST00000291358 0.382±0.00 N/A N/A 0.924±0.00 0.537±0.00 N/A N/A 0.918±0.60 0.344±0.07 N/A N/A 1.419±0.68 0.802±0.24 5.595±2.15
ENST00000537469 N/A 0.908±0.00 0.225±0.00 0.814±0.00 N/A 0.487±0.00 0.264±0.09 0.632±0.00 N/A N/A N/A 1.001±0.11 0.570±0.00 3.901±0.00
ENST00000617816 0.193±0.00 1.176±0.00 N/A 0.659±0.00 0.797±0.00 N/A N/A N/A N/A 0.698±0.00 0.200±0.00 N/A N/A N/A
ENSG00000224066 ENST00000373604 N/A 3.496±0.00 N/A 2.792±0.00 1.079±0.00 1.457±0.00 N/A 1.003±0.00 1.043±0.00 N/A 2.958±0.00 N/A N/A 7.267±0.00
ENST00000421616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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