C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003Q2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000034907-ENSDARG00000034907 CGP 7955 16:37064389-37074300
GeneTranscriptPositionBiotype
ENSDARG00000033655 (stmn1b)
stathmin 1b 		ENSDART00000041007 (stmn1b-001) 37064927-37068618 protein_coding
ENSDARG00000034907 (paqr7b)
progestin and adipoQ receptor family member VII, b 		ENSDART00000043291 (paqr7b-201) 37072898-37074300 protein_coding
ENSDART00000144069 (paqr7b-001) 37064389-37074217 protein_coding
ENSDART00000144718 (paqr7b-002) 37069821-37073263 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003Q2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182749-ENSG00000117632 CGP 9606 1:25861210-25906991
GeneTranscriptPositionBiotype
ENSG00000117632 (STMN1)
stathmin 1 		ENST00000357865 (STMN1-003) 25900595-25906991 protein_coding
ENST00000374291 (STMN1-005) 25900741-25905128 protein_coding
ENST00000399728 (STMN1-201) 25900118-25906153 protein_coding
ENST00000426559 (STMN1-008) 25885440-25906466 protein_coding
ENST00000446334 (STMN1-004) 25901612-25905489 protein_coding
ENST00000455785 (STMN1-001) 25900102-25906466 protein_coding
ENST00000465604 (STMN1-002) 25900568-25906417 processed_transcript
ENST00000485226 (STMN1-007) 25901407-25903813 processed_transcript
ENST00000513116 (STMN1-009) 25884181-25892607 processed_transcript
ENSG00000182749 (PAQR7)
progestin and adipoQ receptor family member VII 		ENST00000374296 (PAQR7-001) 25861210-25871253 protein_coding
ENSG00000207302 (Y_RNA)
Y RNA 		ENST00000384572 (Y_RNA.1-728) 25877496-25877605 misc_RNA
ENSG00000223624 (RP1-125I3.4)
 ENST00000453780 (RP1-125I3.4-001) 25888970-25889109 processed_pseudogene
ENSG00000229786 (SNRPFP2)
small nuclear ribonucleoprotein polypeptide F pseudogene 2 		ENST00000440710 (SNRPFP2-001) 25887360-25887610 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Q2_0001ENSDARG00000033655ENSDART00000041007ENSDARG00000034907ENSDART00000043291ENSDART00000144069ENSDART00000144718CIL_0003Q2_0002ENSG00000117632ENST00000357865ENST00000374291ENST00000399728ENST00000426559ENST00000446334ENST00000455785ENST00000465604ENST00000485226ENST00000513116ENSG00000182749ENST00000374296ENSG00000207302ENST00000384572ENSG00000223624ENST00000453780ENSG00000229786ENST00000440710
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Q2_0001ENSDARG00000033655ENSDART00000041007ENSDARG00000034907ENSDART00000043291ENSDART00000144069CIL_0003Q2_0002ENSG00000117632ENST00000357865ENST00000374291ENST00000455785ENST00000465604ENST00000485226ENSG00000182749ENST00000374296ENSG00000207302ENST00000384572ENSG00000223624ENST00000453780ENSG00000229786ENST00000440710
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000033655 ENSDART00000041007 N/A N/A N/A 631.991±258.98 N/A N/A 2.409±0.89 4.807±0.35 0.231±0.00 N/A 19.872±0.00 N/A N/A N/A
ENSDARG00000034907 ENSDART00000043291 N/A N/A N/A 5.021±0.00 N/A N/A 0.294±0.00 0.079±0.00 N/A N/A 0.500±0.00 N/A N/A N/A
ENSDART00000144069 N/A N/A N/A N/A N/A N/A N/A 0.081±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000144718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000117632 ENST00000357865 N/A N/A N/A N/A 4.770±0.00 1.499±0.00 6.226±0.00 5.847±5.29 N/A 5.847±0.00 1.322±0.62 94.800±51.40 65.407±26.49 104.283±72.82
ENST00000374291 5.575±0.00 25.857±0.00 5.202±0.00 253.398±135.86 12.107±5.57 22.010±17.87 4.238±3.07 9.362±7.03 2.059±0.56 13.854±10.49 1.778±0.96 86.560±81.63 58.813±39.41 181.006±119.66
ENST00000399728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455785 7.162±0.00 16.444±0.00 N/A 131.258±49.03 6.439±1.40 10.026±6.08 1.927±1.38 5.294±4.38 0.666±0.00 5.170±2.89 1.049±0.72 32.207±25.93 14.725±2.01 59.356±0.00
ENST00000465604 N/A N/A N/A N/A N/A N/A N/A 0.322±0.00 0.152±0.00 N/A N/A 1.219±0.00 N/A N/A
ENST00000485226 N/A N/A N/A N/A N/A N/A N/A N/A 1.136±0.00 N/A N/A N/A N/A N/A
ENST00000513116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182749 ENST00000374296 0.333±0.00 5.221±0.00 2.823±0.00 0.837±0.51 1.644±1.08 1.606±1.18 0.466±0.26 6.538±5.75 1.234±0.49 3.033±0.00 0.871±0.00 6.229±4.62 16.543±0.56 3.310±0.00
ENSG00000207302 ENST00000384572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.115±0.97
ENSG00000223624 ENST00000453780 N/A 0.381±0.00 N/A N/A N/A N/A N/A N/A N/A 5.432±0.00 0.321±0.00 N/A N/A 0.222±0.00
ENSG00000229786 ENST00000440710 N/A 0.336±0.00 N/A 0.449±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.134±0.08

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