C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stathmin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000426559 STMN1-008 ENSG00000117632 9606 - 1:25885440-25906466 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Q2 CIL_0003Q2_0002 CGP 1:25861210-25906991

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 TAS signal transducer activity
GO:0005515 IEA protein binding
GO:0005622 IDA intracellular
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005874 IEA microtubule
GO:0007019 IDA microtubule depolymerization
GO:0007052 IDA mitotic spindle organization
GO:0007165 NAS signal transduction
GO:0007409 IEA axonogenesis
GO:0007420 IEA brain development
GO:0009615 IEP response to virus
GO:0015631 IDA tubulin binding
GO:0016020 IEA membrane
GO:0031110 IEA regulation of microtubule polymerization or depolymerization
GO:0031115 IEA negative regulation of microtubule polymerization
GO:0035556 TAS intracellular signal transduction
GO:0051272 IEA positive regulation of cellular component movement
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030636 Stmn1-001 protein_coding Mus_musculus 0 628
ENSMUST00000105867 Stmn1-005 protein_coding Mus_musculus 0 540
ENSMUST00000105868 Stmn1-004 protein_coding Mus_musculus 0 512
ENSMUST00000120560 Gm11223-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000127279 Stmn1-003 protein_coding Mus_musculus 0 433

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