C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003QJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128346-ENSG00000100142 CGP 9606 22:37943050-38041915
GeneTranscriptPositionBiotype
ENSG00000222044 (RP5-1039K5.16)
 ENST00000410099 (RP5-1039K5.16-001) 38032165-38034228 antisense
ENSG00000278948 (RP5-1039K5.12)
 ENST00000624344 (RP5-1039K5.12-001) 37943050-37944898 TEC
ENSG00000279010 (MIR4534)
microRNA 6820 		ENST00000623111 (MIR4534-001) 37948352-38002889 sense_overlapping
CIL_0003QJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033029-ENSMUSG00000033020 CGP 10090 15:79129349-79151774
GeneTranscriptPositionBiotype
ENSMUSG00000033020 (Polr2f)
polymerase (RNA) II (DNA directed) polypeptide F 		ENSMUST00000040077 (Polr2f-201) 79141351-79151774 protein_coding
ENSMUSG00000033029 (1700088E04Rik)
RIKEN cDNA 1700088E04 gene 		ENSMUST00000169604 (1700088E04Rik-001) 79134661-79141253 protein_coding
ENSMUST00000185944 (1700088E04Rik-007) 79129349-79134916 processed_transcript
ENSMUST00000186053 (1700088E04Rik-002) 79137423-79141253 protein_coding
ENSMUST00000186459 (1700088E04Rik-005) 79137132-79141203 nonsense_mediated_decay
ENSMUST00000186559 (1700088E04Rik-006) 79135009-79136713 processed_transcript
ENSMUST00000187550 (1700088E04Rik-008) 79134655-79141187 protein_coding
ENSMUST00000188562 (1700088E04Rik-012) 79135056-79141205 protein_coding
ENSMUST00000189761 (1700088E04Rik-009) 79135082-79141182 nonsense_mediated_decay
ENSMUST00000190400 (1700088E04Rik-013) 79137425-79140978 protein_coding
ENSMUST00000190509 (1700088E04Rik-011) 79134992-79141230 protein_coding
ENSMUST00000190730 (1700088E04Rik-010) 79135017-79141234 protein_coding
ENSMUST00000190959 (1700088E04Rik-003) 79134655-79141239 protein_coding
ENSMUST00000191006 (1700088E04Rik-014) 79137420-79139275 protein_coding
ENSMUSG00000033039 (Micall1)
microtubule associated monooxygenase, calponin and LIM domain containing -like 1 		ENSMUST00000040320 (Micall1-201) 79108972-79136897 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QJ_0001ENSG00000222044ENST00000410099ENSG00000278948ENST00000624344ENSG00000279010ENST00000623111CIL_0003QJ_0002ENSMUSG00000033020ENSMUST00000040077ENSMUSG00000033029ENSMUST00000169604ENSMUST00000185944ENSMUST00000186053ENSMUST00000186459ENSMUST00000186559ENSMUST00000187550ENSMUST00000188562ENSMUST00000189761ENSMUST00000190400ENSMUST00000190509ENSMUST00000190730ENSMUST00000190959ENSMUST00000191006ENSMUSG00000033039ENSMUST00000040320
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QJ_0001ENSG00000222044ENST00000410099ENSG00000278948ENST00000624344ENSG00000279010ENST00000623111CIL_0003QJ_0002ENSMUSG00000033020ENSMUST00000040077ENSMUSG00000033029ENSMUST00000169604ENSMUST00000185944ENSMUST00000186559ENSMUST00000187550ENSMUSG00000033039ENSMUST00000040320
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000222044 ENST00000410099 0.037±0.00 0.372±0.00 N/A 0.376±0.00 0.191±0.00 0.132±0.00 0.221±0.00 0.142±0.00 0.018±0.00 0.137±0.00 0.051±0.00 0.091±0.04 N/A 0.204±0.19
ENSG00000278948 ENST00000624344 N/A N/A 0.863±0.00 N/A N/A 8.311±0.00 N/A N/A N/A 2.641±0.98 0.741±0.00 1.680±0.00 7.082±2.63 21.978±0.00
ENSG00000279010 ENST00000623111 0.471±0.00 0.657±0.00 0.058±0.00 1.094±0.00 0.339±0.23 0.270±0.13 0.119±0.06 0.363±0.00 0.201±0.09 0.139±0.05 0.126±0.00 0.206±0.13 N/A 0.549±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033020 ENSMUST00000040077 40.620±7.76 49.053±3.18 122.104±10.26 80.959±29.98 26.946±10.48 45.586±9.37 39.423±5.97 52.461±10.84 54.404±32.74 31.293±2.07 37.052±2.80 53.214±36.20 150.755±85.09 31.617±0.41
ENSMUSG00000033029 ENSMUST00000169604 N/A N/A N/A N/A N/A N/A N/A 8.238±0.30 N/A 13.298±1.23 N/A 14.445±0.12 N/A 49.914±3.86
ENSMUST00000185944 N/A N/A N/A 4.422±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 6.321±0.76 15.538±0.00
ENSMUST00000186053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186559 N/A N/A N/A N/A 10.747±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.861±0.21 N/A N/A N/A
ENSMUST00000188562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033039 ENSMUST00000040320 16.726±6.80 19.690±4.85 25.527±1.41 8.299±1.92 12.318±4.31 7.951±0.98 11.883±2.55 7.027±1.61 1.789±0.75 10.904±1.49 2.486±0.67 12.532±3.98 12.826±9.89 17.979±3.50

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