C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003SP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000150456-ENSG00000132953 CGP 9606 13:20728731-20903048
GeneTranscriptPositionBiotype
ENSG00000132953 (XPO4)
exportin 4 		ENST00000255305 (XPO4-001) 20777329-20902810 protein_coding
ENST00000400602 (XPO4-201) 20777330-20902774 protein_coding
ENST00000465018 (XPO4-003) 20868413-20902747 processed_transcript
ENST00000490513 (XPO4-002) 20855634-20903048 processed_transcript
ENSG00000150456 (N6AMT2)
N-6 adenine-specific DNA methyltransferase 2 (putative) 		ENST00000382754 (N6AMT2-001) 20728931-20773918 protein_coding
ENST00000382758 (N6AMT2-002) 20728731-20773949 protein_coding
ENST00000460374 (N6AMT2-004) 20757229-20773958 processed_transcript
ENSG00000233524 (RANP8)
RAN, member RAS oncogene family pseudogene 8 		ENST00000444720 (RANP8-001) 20747035-20748057 processed_pseudogene
ENSG00000275485 (RP11-261P13.6)
 ENST00000619006 (RP11-261P13.6-001) 20768876-20769375 sense_intronic
CIL_0003SP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021951-ENSMUSG00000021952 CGP 10090 14:57549598-57665430
GeneTranscriptPositionBiotype
ENSMUSG00000021951 (N6amt2)
N-6 adenine-specific DNA methyltransferase 2 (putative) 		ENSMUST00000022518 (N6amt2-201) 57549598-57571569 protein_coding
ENSMUSG00000021952 (Xpo4)
exportin 4 		ENSMUST00000089482 (Xpo4-201) 57582271-57664956 protein_coding
ENSMUST00000172524 (Xpo4-003) 57642029-57665430 nonsense_mediated_decay
ENSMUST00000172539 (Xpo4-008) 57641779-57664964 processed_transcript
ENSMUST00000172647 (Xpo4-007) 57642516-57648657 retained_intron
ENSMUST00000173172 (Xpo4-005) 57641800-57664967 retained_intron
ENSMUST00000173638 (Xpo4-006) 57647962-57664989 retained_intron
ENSMUST00000173940 (Xpo4-004) 57641785-57665235 retained_intron
ENSMUST00000174152 (Xpo4-002) 57596990-57664992 nonsense_mediated_decay
ENSMUST00000174424 (Xpo4-009) 57629448-57664956 nonsense_mediated_decay
ENSMUST00000174545 (Xpo4-001) 57581002-57665430 protein_coding
ENSMUSG00000021959 (Lats2)
large tumor suppressor 2 		ENSMUST00000022531 (Lats2-001) 57689662-57746123 protein_coding
ENSMUST00000038381 (Lats2-005) 57722189-57734300 protein_coding
ENSMUST00000077981 (Lats2-006) 57722189-57734300 protein_coding
ENSMUST00000173077 (Lats2-008) 57734253-57746578 processed_transcript
ENSMUST00000173732 (Lats2-009) 57734180-57744654 protein_coding
ENSMUST00000173964 (Lats2-010) 57697227-57699890 protein_coding
ENSMUST00000173990 (Lats2-003) 57693544-57746105 protein_coding
ENSMUST00000174166 (Lats2-007) 57703051-57758388 protein_coding
ENSMUST00000174213 (Lats2-002) 57691098-57746121 nonsense_mediated_decay
ENSMUST00000174694 (Lats2-004) 57642077-57746103 nonsense_mediated_decay
ENSMUSG00000097933 (1700039M10Rik)
RIKEN cDNA 1700039M10 gene 		ENSMUST00000180397 (1700039M10Rik-201) 57571624-57572368 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SP_0001ENSG00000132953ENST00000255305ENST00000400602ENST00000465018ENST00000490513ENSG00000150456ENST00000382754ENST00000382758ENST00000460374ENSG00000233524ENST00000444720ENSG00000275485ENST00000619006CIL_0003SP_0002ENSMUSG00000021951ENSMUST00000022518ENSMUSG00000021952ENSMUST00000089482ENSMUST00000172524ENSMUST00000172539ENSMUST00000172647ENSMUST00000173172ENSMUST00000173638ENSMUST00000173940ENSMUST00000174152ENSMUST00000174424ENSMUST00000174545ENSMUSG00000021959ENSMUST00000022531ENSMUST00000038381ENSMUST00000077981ENSMUST00000173077ENSMUST00000173732ENSMUST00000173964ENSMUST00000173990ENSMUST00000174166ENSMUST00000174213ENSMUST00000174694ENSMUSG00000097933ENSMUST00000180397
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SP_0001ENSG00000132953ENST00000255305ENST00000400602ENSG00000150456ENST00000382754ENST00000382758ENST00000460374ENSG00000233524ENST00000444720ENSG00000275485ENST00000619006CIL_0003SP_0002ENSMUSG00000021951ENSMUST00000022518ENSMUSG00000021952ENSMUST00000089482ENSMUST00000174545ENSMUSG00000021959ENSMUST00000022531ENSMUST00000173990ENSMUST00000174213ENSMUST00000174694ENSMUSG00000097933ENSMUST00000180397
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132953 ENST00000255305 N/A 1.698±0.00 1.089±0.00 0.410±0.10 1.940±0.00 N/A 0.411±0.00 1.445±0.47 0.792±0.00 0.445±0.00 3.620±2.30 1.011±0.30 0.930±0.09 1.949±0.18
ENST00000400602 1.787±0.00 N/A N/A 0.351±0.00 2.578±0.00 N/A N/A N/A 0.787±0.00 0.983±0.25 N/A 0.876±0.41 N/A N/A
ENST00000465018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000150456 ENST00000382754 3.038±0.00 4.016±0.00 0.597±0.00 4.734±0.00 4.561±0.00 1.442±1.35 2.109±0.00 1.135±0.00 2.563±1.10 1.788±1.16 1.843±1.48 4.075±1.98 3.491±1.53 4.962±2.54
ENST00000382758 0.881±0.00 N/A N/A 2.114±1.61 0.916±0.29 1.933±0.00 0.550±0.05 2.704±0.70 0.535±0.00 N/A N/A 1.708±0.40 1.400±0.51 0.432±0.00
ENST00000460374 N/A N/A N/A N/A N/A N/A 0.820±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000233524 ENST00000444720 N/A 0.051±0.00 N/A 0.034±0.00 0.711±0.00 0.128±0.00 0.061±0.00 N/A 0.044±0.00 0.636±0.00 N/A 0.134±0.02 0.040±0.00 0.211±0.09
ENSG00000275485 ENST00000619006 0.076±0.00 0.174±0.00 N/A N/A 0.096±0.00 N/A 0.023±0.00 0.048±0.00 N/A N/A N/A 0.328±0.16 N/A 0.239±0.13
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021951 ENSMUST00000022518 16.086±1.15 5.362±0.93 16.537±1.55 16.298±2.53 11.754±4.20 7.589±1.06 19.882±0.44 13.045±0.73 8.658±5.68 9.550±2.00 18.645±2.75 9.651±4.01 25.629±4.61 7.167±2.39
ENSMUSG00000021952 ENSMUST00000089482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.546±0.00
ENSMUST00000172524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174545 5.263±0.00 N/A 2.730±0.00 0.993±0.00 2.749±0.20 N/A 2.630±0.00 2.320±0.15 1.359±0.29 N/A N/A N/A 2.484±0.79 N/A
ENSMUSG00000021959 ENSMUST00000022531 14.154±1.27 24.088±7.55 15.959±0.57 3.947±0.70 16.936±6.18 11.152±3.95 8.130±0.55 15.762±3.17 3.356±0.75 45.644±6.79 3.644±0.51 25.131±8.75 8.362±4.16 20.080±8.58
ENSMUST00000038381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000077981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.478±0.00 N/A 3.281±0.00
ENSMUST00000174166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174213 6.313±0.73 5.806±1.44 N/A N/A 5.964±0.22 6.626±1.35 N/A 6.374±1.52 1.118±0.00 9.021±0.00 N/A 10.062±4.15 N/A 28.494±3.39
ENSMUST00000174694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.351±0.27 N/A 5.953±0.00
ENSMUSG00000097933 ENSMUST00000180397 N/A N/A 0.021±0.00 0.138±0.05 N/A 0.327±0.00 N/A N/A 0.016±0.00 N/A N/A 0.139±0.00 0.049±0.05 6.997±2.63

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