C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exportin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000255305 XPO4-001 ENSG00000132953 9606 - 13:20777329-20902810 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000255305
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000255305 1.698±0.00 1.089±0.00 0.410±0.10 1.940±0.00 0.411±0.00 1.445±0.47 0.792±0.00 0.445±0.00 3.620±2.30 1.011±0.30 0.930±0.09 1.949±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SP CIL_0003SP_0001 CGP 13:20728731-20903048
CIL_0003SQ CIL_0003SQ_0001 CGP 13:20777329-21061547

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0015031 IEA protein transport
GO:0046827 IMP positive regulation of protein export from nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174545 Xpo4-001 protein_coding Mus_musculus 0 5387
ENSMUST00000089482 Xpo4-201 protein_coding Mus_musculus 0 4865
ENSMUST00000174152 Xpo4-002 nonsense_mediated_decay Mus_musculus 0 2785
ENSMUST00000173940 Xpo4-004 retained_intron Mus_musculus 0 592
ENSMUST00000172539 Xpo4-008 processed_transcript Mus_musculus 0 481
ENSMUST00000172524 Xpo4-003 nonsense_mediated_decay Mus_musculus 0 407
ENSMUST00000173638 Xpo4-006 retained_intron Mus_musculus 0 340
ENSMUST00000173172 Xpo4-005 retained_intron Mus_musculus 0 300
ENSMUST00000174424 Xpo4-009 nonsense_mediated_decay Mus_musculus 0 261

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