C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exportin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174545 Xpo4-001 ENSMUSG00000021952 10090 - 14:57581002-57665430 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverPlacentaENSMUST00000174545
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Placenta
ENSMUST00000174545 5.263±0.00 2.730±0.00 0.993±0.00 2.749±0.20 2.630±0.00 2.320±0.15 1.359±0.29 2.484±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SP CIL_0003SP_0002 CGP 14:57549598-57665430
CIL_0003SQ CIL_0003SQ_0002 CGP 14:57581002-57758388

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0015031 IEA protein transport
GO:0046827 IEA positive regulation of protein export from nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255305 XPO4-001 protein_coding Homo_sapiens 0 5387
ENST00000353258 GDE1-001 protein_coding Homo_sapiens 0.0002 53
ENST00000400602 XPO4-201 protein_coding Homo_sapiens 0 5315
ENST00000460794 TARS2-003 retained_intron Homo_sapiens 0.000003 57
ENST00000465018 XPO4-003 processed_transcript Homo_sapiens 0 296
ENST00000490513 XPO4-002 processed_transcript Homo_sapiens 0 514
ENST00000564172 GDE1-002 nonsense_mediated_decay Homo_sapiens 0.0001 53
ENST00000612499 IFI27-003 retained_intron Homo_sapiens 0.00000002 66

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