C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003TY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000046604-ENSG00000118271 CGP 9606 18:31498043-31599021
GeneTranscriptPositionBiotype
ENSG00000046604 (DSG2)
desmoglein 2 		ENST00000261590 (DSG2-001) 31498043-31549008 protein_coding
ENST00000585206 (DSG2-002) 31498220-31522608 protein_coding
ENSG00000118271 (TTR)
transthyretin 		ENST00000237014 (TTR-001) 31591726-31599011 protein_coding
ENST00000432547 (TTR-002) 31591877-31593545 retained_intron
ENST00000541025 (TTR-003) 31591877-31595849 retained_intron
ENST00000610404 (TTR-201) 31591767-31599021 protein_coding
ENST00000613781 (TTR-202) 31591767-31598675 protein_coding
CIL_0003TY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044393-ENSMUSG00000061808 CGP 10090 18:20558074-20674324
GeneTranscriptPositionBiotype
ENSMUSG00000044393 (Dsg2)
desmoglein 2 		ENSMUST00000059787 (Dsg2-001) 20558074-20604521 protein_coding
ENSMUST00000120102 (Dsg2-002) 20558155-20585553 protein_coding
ENSMUST00000121837 (Dsg2-003) 20558246-20582916 protein_coding
ENSMUSG00000061808 (Ttr)
transthyretin 		ENSMUST00000075312 (Ttr-201) 20665250-20674324 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003TY_0001ENSG00000046604ENST00000261590ENST00000585206ENSG00000118271ENST00000237014ENST00000432547ENST00000541025ENST00000610404ENST00000613781CIL_0003TY_0002ENSMUSG00000044393ENSMUST00000059787ENSMUST00000120102ENSMUST00000121837ENSMUSG00000061808ENSMUST00000075312
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003TY_0001ENSG00000046604ENST00000261590ENSG00000118271ENST00000237014ENST00000541025ENST00000613781CIL_0003TY_0002ENSMUSG00000044393ENSMUST00000059787ENSMUST00000120102ENSMUST00000121837ENSMUSG00000061808ENSMUST00000075312
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000046604 ENST00000261590 20.011±0.00 1.454±0.00 8.273±0.00 0.146±0.02 12.765±4.29 17.472±9.55 6.745±3.74 7.652±5.42 3.680±1.31 3.996±0.01 0.322±0.02 13.042±6.61 11.915±3.20 1.735±0.07
ENST00000585206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000118271 ENST00000237014 N/A N/A N/A 388.698±207.12 1.804±1.66 0.559±0.50 0.340±0.00 883.915±883.14 170.253±169.86 0.013±0.00 N/A 0.908±0.35 2.045±1.11 0.683±0.44
ENST00000432547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541025 N/A N/A N/A N/A 0.075±0.00 N/A 0.056±0.00 0.092±0.00 N/A N/A N/A N/A N/A N/A
ENST00000610404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613781 0.094±0.00 N/A 1.475±0.00 437.782±217.19 6.908±0.00 1.251±0.00 0.031±0.00 1831.920±1831.59 79.156±77.91 0.651±0.00 0.682±0.00 3.075±2.98 19.725±0.00 1.761±1.64
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044393 ENSMUST00000059787 2.552±0.51 0.925±0.37 11.380±0.66 N/A 3.302±1.19 48.745±3.00 11.902±1.34 2.443±0.38 N/A 1.833±0.28 0.033±0.03 3.479±0.55 32.113±2.87 0.133±0.09
ENSMUST00000120102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00
ENSMUST00000121837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 62.276±0.00 0.397±0.00
ENSMUSG00000061808 ENSMUST00000075312 0.555±0.01 5.107±0.85 19.623±0.13 482.519±55.66 30.965±0.44 33.222±3.13 N/A 85.577±6.50 4269.243±2888.75 2.354±0.79 0.147±0.14 6.312±1.37 1357.799±1174.03 0.052±0.00

Loading