C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000419_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056587-ENSDARG00000056587 CGP 7955 7:28581189-28823102
GeneTranscriptPositionBiotype
ENSDARG00000056587 (cyp2r1)
cytochrome P450, family 2, subfamily R, polypeptide 1 		ENSDART00000079091 (cyp2r1-001) 28817515-28823102 protein_coding
ENSDART00000148417 (cyp2r1-002) 28581189-28821481 protein_coding
ENSDART00000148782 (cyp2r1-004) 28729079-28821541 protein_coding
ENSDART00000149496 (cyp2r1-003) 28581208-28786596 processed_transcript
ENSDARG00000056590 (calca)
calcitonin/calcitonin-related polypeptide, alpha 		ENSDART00000079112 (calca-001) 28806424-28811889 protein_coding
ENSDART00000100989 (calca-002) 28809102-28811889 protein_coding
CIL_000419_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186104-ENSG00000175868 CGP 9606 11:14877440-15082342
GeneTranscriptPositionBiotype
ENSG00000110680 (CALCA)
calcitonin-related polypeptide alpha 		ENST00000331587 (CALCA-001) 14968501-14972354 protein_coding
ENST00000361010 (CALCA-201) 14966669-14972286 protein_coding
ENST00000396372 (CALCA-003) 14968706-14972273 protein_coding
ENST00000469608 (CALCA-002) 14967040-14972272 nonsense_mediated_decay
ENST00000486207 (CALCA-004) 14966668-14971201 protein_coding
ENST00000494746 (CALCA-005) 14966671-14970016 retained_intron
ENSG00000175868 (CALCB)
calcitonin-related polypeptide beta 		ENST00000324229 (CALCB-002) 15073562-15078632 protein_coding
ENST00000523376 (CALCB-001) 14904997-15078636 protein_coding
ENST00000533448 (CALCB-003) 15073562-15082342 protein_coding
ENSG00000186104 (CYP2R1)
cytochrome P450, family 2, subfamily R, polypeptide 1 		ENST00000334636 (CYP2R1-001) 14877440-14892252 protein_coding
ENST00000525015 (CYP2R1-006) 14878012-14885841 nonsense_mediated_decay
ENST00000526276 (CYP2R1-008) 14880315-14891492 processed_transcript
ENST00000526489 (CYP2R1-009) 14880135-14890531 processed_transcript
ENST00000529043 (CYP2R1-007) 14880634-14891530 processed_transcript
ENST00000530609 (CYP2R1-004) 14878009-14891640 nonsense_mediated_decay
ENST00000532378 (CYP2R1-003) 14878038-14891651 protein_coding
ENST00000532641 (CYP2R1-010) 14880337-14885977 processed_transcript
ENST00000532805 (CYP2R1-005) 14878007-14887334 nonsense_mediated_decay
ENST00000534686 (CYP2R1-002) 14878009-14891662 nonsense_mediated_decay
ENSG00000250640 (OR7E41P)
olfactory receptor, family 7, subfamily E, member 41 pseudogene 		ENST00000515189 (OR7E41P-001) 14987671-14988694 unprocessed_pseudogene
ENSG00000253179 (CALCP)
calcitonin pseudogene 		ENST00000522108 (CALCP-001) 14907518-14907986 unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000419_0001ENSDARG00000056587ENSDART00000079091ENSDART00000148417ENSDART00000148782ENSDART00000149496ENSDARG00000056590ENSDART00000079112ENSDART00000100989CIL_000419_0002ENSG00000110680ENST00000331587ENST00000361010ENST00000396372ENST00000469608ENST00000486207ENST00000494746ENSG00000175868ENST00000324229ENST00000523376ENST00000533448ENSG00000186104ENST00000334636ENST00000525015ENST00000526276ENST00000526489ENST00000529043ENST00000530609ENST00000532378ENST00000532641ENST00000532805ENST00000534686ENSG00000250640ENST00000515189ENSG00000253179ENST00000522108
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000419_0001ENSDARG00000056587ENSDART00000079091ENSDART00000148782ENSDARG00000056590ENSDART00000079112ENSDART00000100989CIL_000419_0002ENSG00000110680ENST00000331587ENST00000396372ENST00000469608ENST00000486207ENST00000494746ENSG00000175868ENST00000324229ENST00000523376ENST00000533448ENSG00000186104ENST00000334636ENST00000525015ENST00000526489ENST00000529043ENST00000530609ENST00000532378ENST00000532641ENST00000532805ENST00000534686ENSG00000250640ENST00000515189ENSG00000253179ENST00000522108
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056587 ENSDART00000079091 N/A N/A N/A 0.388±0.32 N/A N/A 0.757±0.05 1.606±1.22 9.838±0.00 N/A 1.005±0.00 N/A N/A N/A
ENSDART00000148417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148782 N/A N/A N/A 0.440±0.00 N/A N/A 0.583±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000056590 ENSDART00000079112 N/A N/A N/A 15.031±5.74 N/A N/A 0.180±0.00 0.073±0.00 N/A N/A 0.601±0.00 N/A N/A N/A
ENSDART00000100989 N/A N/A N/A N/A N/A N/A 0.182±0.00 0.332±0.00 5.164±0.00 N/A 0.214±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110680 ENST00000331587 0.071±0.00 0.025±0.00 0.910±0.00 N/A N/A N/A N/A 4.897±0.00 4.902±0.00 N/A N/A 0.031±0.00 N/A N/A
ENST00000361010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396372 N/A N/A N/A N/A N/A N/A N/A N/A 2.901±0.00 0.374±0.00 N/A N/A N/A 0.067±0.03
ENST00000469608 N/A N/A N/A N/A N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000486207 0.034±0.00 N/A N/A 0.018±0.00 N/A N/A N/A 2.882±0.00 N/A N/A N/A 0.015±0.00 N/A N/A
ENST00000494746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 N/A 0.065±0.00
ENSG00000175868 ENST00000324229 N/A N/A N/A 0.027±0.01 N/A 0.534±0.49 N/A 0.302±0.00 N/A N/A N/A 0.037±0.00 N/A 0.128±0.00
ENST00000523376 0.007±0.00 N/A 0.073±0.00 N/A N/A N/A N/A N/A 0.053±0.05 N/A N/A 0.033±0.00 N/A 0.082±0.02
ENST00000533448 N/A 0.014±0.00 N/A N/A 0.004±0.00 N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A 0.013±0.00
ENSG00000186104 ENST00000334636 N/A N/A N/A N/A N/A 0.913±0.00 0.173±0.00 N/A 0.191±0.00 N/A N/A 0.363±0.00 N/A N/A
ENST00000525015 2.396±0.00 N/A N/A 2.525±0.00 N/A N/A N/A 2.252±0.00 2.416±0.00 1.381±0.00 N/A 3.430±0.39 1.141±0.00 9.252±0.00
ENST00000526276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526489 N/A N/A N/A 0.670±0.00 1.119±0.00 1.005±0.00 N/A 1.290±0.00 N/A 1.065±0.00 0.332±0.00 1.647±0.00 0.522±0.00 3.250±0.00
ENST00000529043 N/A N/A 2.360±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530609 N/A 1.733±0.00 N/A N/A 0.581±0.00 0.853±0.00 0.273±0.00 N/A 0.502±0.00 N/A N/A 1.234±0.00 0.688±0.19 3.940±0.51
ENST00000532378 0.883±0.00 2.132±0.00 N/A 0.426±0.00 1.109±0.00 0.447±0.00 0.792±0.00 1.115±0.00 0.424±0.03 0.733±0.00 0.527±0.00 2.039±1.03 0.673±0.45 4.206±1.69
ENST00000532641 N/A N/A N/A N/A N/A N/A N/A N/A 1.205±0.00 N/A 0.406±0.00 2.263±0.00 N/A N/A
ENST00000532805 N/A 0.910±0.00 0.878±0.00 0.613±0.00 N/A N/A 0.159±0.00 0.384±0.00 0.346±0.14 1.364±0.00 N/A N/A N/A N/A
ENST00000534686 0.555±0.00 N/A N/A 0.593±0.00 N/A 0.528±0.00 0.392±0.00 0.835±0.00 N/A N/A 0.507±0.00 1.053±0.10 0.232±0.00 2.314±0.00
ENSG00000250640 ENST00000515189 N/A 0.027±0.00 0.109±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A 0.049±0.02
ENSG00000253179 ENST00000522108 0.257±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.453±0.00

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