C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcitonin-related polypeptide alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486207 CALCA-004 ENSG00000110680 9606 - 11:14966668-14971201 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyOvaryENST00000486207
Transcript ID Adipose Brain Kidney Ovary
ENST00000486207 0.034±0.00 0.018±0.00 2.882±0.00 0.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000419 CIL_000419_0002 CGP 11:14877440-15082342

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001935 IDA endothelial cell proliferation
GO:0001944 IDA vasculature development
GO:0001976 IDA neurological system process involved in regulation of systemic arterial blood pressure
GO:0002031 IDA G-protein coupled receptor internalization
GO:0005102 IDA receptor binding
GO:0005179 IEA hormone activity
GO:0005515 IPI protein binding
GO:0005576 TAS:IEA extracellular region
GO:0005615 IDA extracellular space
GO:0005737 IDA cytoplasm
GO:0006468 IDA protein phosphorylation
GO:0007159 IDA leukocyte cell-cell adhesion
GO:0007190 IDA activation of adenylate cyclase activity
GO:0007267 TAS cell-cell signaling
GO:0008217 NAS regulation of blood pressure
GO:0010523 IDA negative regulation of calcium ion transport into cytosol
GO:0030819 IDA positive regulation of cAMP biosynthetic process
GO:0031623 IDA receptor internalization
GO:0032403 IDA protein complex binding
GO:0032730 IDA positive regulation of interleukin-1 alpha production
GO:0032757 IDA positive regulation of interleukin-8 production
GO:0043542 IDA endothelial cell migration
GO:0045651 IDA positive regulation of macrophage differentiation
GO:0045671 IDA negative regulation of osteoclast differentiation
GO:0045776 IDA negative regulation of blood pressure
GO:0045779 IDA negative regulation of bone resorption
GO:0045909 IDA positive regulation of vasodilation
GO:0051480 IDA cytosolic calcium ion homeostasis
GO:0051482 IDA positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032906 Calca-201 protein_coding Mus_musculus 0 531
ENSMUST00000032907 Calca-202 protein_coding Mus_musculus 0 195

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