C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000425_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000237649-ENSG00000112511 CGP 9606 6:33391536-33416453
GeneTranscriptPositionBiotype
ENSG00000112511 (PHF1)
PHD finger protein 1 		ENST00000374512 (PHF1-001) 33410961-33416453 protein_coding
ENST00000374516 (PHF1-002) 33410961-33416453 protein_coding
ENST00000427004 (PHF1-005) 33410399-33413294 protein_coding
ENST00000427826 (PHF1-011) 33415065-33416414 nonsense_mediated_decay
ENST00000428274 (PHF1-006) 33410751-33413831 protein_coding
ENST00000459809 (PHF1-007) 33410758-33412779 nonsense_mediated_decay
ENST00000479029 (PHF1-010) 33415241-33416312 retained_intron
ENST00000486845 (PHF1-009) 33414336-33416213 retained_intron
ENST00000487667 (PHF1-004) 33410690-33415871 nonsense_mediated_decay
ENST00000488767 (PHF1-008) 33412984-33413944 retained_intron
ENST00000495509 (PHF1-012) 33411126-33416051 nonsense_mediated_decay
ENSG00000237649 (KIFC1)
kinesin family member C1 		ENST00000428849 (KIFC1-001) 33391536-33409924 protein_coding
ENST00000450504 (KIFC1-002) 33391861-33403859 protein_coding
ENST00000486695 (KIFC1-003) 33400091-33403866 retained_intron
ENST00000494554 (KIFC1-004) 33406221-33407090 protein_coding
CIL_000425_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024301-ENSMUSG00000024193 CGP 10090 17:26917091-26937890
GeneTranscriptPositionBiotype
ENSMUSG00000024193 (Phf1)
PHD finger protein 1 		ENSMUST00000073724 (Phf1-201) 26933127-26937890 protein_coding
ENSMUSG00000024301 (Kifc5b)
kinesin family member C5B 		ENSMUST00000078961 (Kifc5b-201) 26917091-26932579 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000425_0001ENSG00000112511ENST00000374512ENST00000374516ENST00000427004ENST00000427826ENST00000428274ENST00000459809ENST00000479029ENST00000486845ENST00000487667ENST00000488767ENST00000495509ENSG00000237649ENST00000428849ENST00000450504ENST00000486695ENST00000494554CIL_000425_0002ENSMUSG00000024193ENSMUST00000073724ENSMUSG00000024301ENSMUST00000078961
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000425_0001ENSG00000112511ENST00000374512ENST00000374516ENST00000427826ENST00000428274ENST00000495509ENSG00000237649ENST00000428849ENST00000450504ENST00000494554CIL_000425_0002ENSMUSG00000024193ENSMUST00000073724ENSMUSG00000024301ENSMUST00000078961
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112511 ENST00000374512 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.263±0.00 N/A N/A N/A N/A
ENST00000374516 13.010±0.00 14.175±0.00 1.917±0.00 3.825±0.00 6.651±4.72 6.795±6.21 4.971±3.99 16.548±0.00 3.859±1.74 30.967±0.00 14.823±0.00 28.431±16.67 15.571±3.03 26.584±0.00
ENST00000427004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.696±0.00 N/A N/A 90.101±0.00
ENST00000428274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.813±0.00 11.235±0.00 73.972±0.00
ENST00000459809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495509 15.691±0.00 18.718±0.00 N/A 17.656±0.00 N/A 13.149±11.97 13.547±0.00 1.649±0.00 N/A 38.451±0.00 13.202±11.99 42.042±0.00 N/A 38.243±12.33
ENSG00000237649 ENST00000428849 0.311±0.00 0.582±0.00 0.052±0.00 0.048±0.00 0.586±0.00 0.516±0.00 0.164±0.00 0.252±0.00 0.149±0.00 N/A N/A 4.731±3.62 4.425±1.16 8.104±3.96
ENST00000450504 7.254±0.00 6.753±0.00 N/A 1.800±0.00 5.937±0.00 10.078±0.00 2.781±0.00 3.325±0.00 3.890±0.00 16.900±0.00 13.319±0.00 1.106±0.00 N/A 6.979±0.00
ENST00000486695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494554 N/A N/A N/A 0.309±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024193 ENSMUST00000073724 17.872±0.30 53.673±10.86 29.662±4.23 16.613±6.83 34.974±17.29 26.492±1.86 12.512±1.88 18.141±3.22 8.141±2.22 42.454±5.45 5.409±1.32 27.857±7.90 5.969±0.57 42.765±16.42
ENSMUSG00000024301 ENSMUST00000078961 0.525±0.17 0.716±0.20 0.584±0.10 2.613±1.28 0.651±0.48 2.214±0.19 0.167±0.05 0.455±0.11 4.330±5.48 0.574±0.09 0.125±0.03 1.653±0.71 3.023±1.88 2.134±0.75

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