C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PHD finger protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495509 PHF1-012 ENSG00000112511 9606 + 6:33411126-33416051 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLungMuscleOvaryTestisENST00000495509
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000495509 15.691±0.00 18.718±0.00 17.656±0.00 13.149±11.97 13.547±0.00 1.649±0.00 38.451±0.00 13.202±11.99 42.042±0.00 38.243±12.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000425 CIL_000425_0001 CGP 6:33391536-33416453
CIL_000252 CIL_000252_0001 CGP 6:33410399-33418317

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073724 Phf1-201 protein_coding Mus_musculus 0 2043

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