C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 16 (monocarboxylic acid transporters), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168579 Slc16a3-202 ENSMUSG00000025161 10090 + 11:120949081-120960868 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryENSMUST00000168579
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary
ENSMUST00000168579 0.271±0.10 0.093±0.02 0.130±0.03 0.164±0.01 0.438±0.05 0.117±0.04 0.088±0.01 0.070±0.02 0.977±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019I CIL_00019I_0002 CGP 11:120826529-120960868
CIL_00043R CIL_00043R_0003 CGP 11:120948480-120991330

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0015293 IEA symporter activity
GO:0015355 IEA secondary active monocarboxylate transmembrane transporter activity
GO:0015629 IEA actin cytoskeleton
GO:0015718 IEA monocarboxylic acid transport
GO:0016021 IEA integral component of membrane
GO:0031965 IEA nuclear membrane
GO:0035879 IEA plasma membrane lactate transport
GO:0044822 IEA poly(A) RNA binding
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392339 SLC16A3-201 protein_coding Homo_sapiens 0 1469
ENST00000392341 SLC16A3-202 protein_coding Homo_sapiens 0 1469
ENST00000581287 SLC16A3-001 protein_coding Homo_sapiens 0 1469
ENST00000582743 SLC16A3-002 protein_coding Homo_sapiens 0 1469
ENST00000617373 SLC16A3-203 protein_coding Homo_sapiens 0 1469
ENST00000619321 SLC16A3-204 protein_coding Homo_sapiens 0 1469

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