C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: casein kinase 1, delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070575 Csnk1d-002 ENSMUSG00000025162 10090 - 11:120961749-120991092 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070575
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070575 30.765±7.07 11.924±3.52 39.232±0.49 12.554±2.79 18.084±4.04 32.834±3.33 5.575±0.71 12.894±1.28 13.925±3.07 27.242±4.69 7.806±1.12 27.856±6.24 33.550±10.10 3.174±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043R CIL_00043R_0003 CGP 11:120948480-120991330
CIL_00075P CIL_00075P_0002 CGP 11:120961749-121039418

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 ISS protein kinase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0006468 ISS protein phosphorylation
GO:0016055 IEA Wnt signaling pathway
GO:0032436 IMP positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032922 IMP circadian regulation of gene expression
GO:0042752 IMP regulation of circadian rhythm
GO:0050321 IEA tau-protein kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269361 CSNK1D-022 nonsense_mediated_decay Homo_sapiens 0 1000
ENST00000314028 CSNK1D-001 protein_coding Homo_sapiens 0 1624
ENST00000392334 CSNK1D-002 protein_coding Homo_sapiens 0 2239
ENST00000398519 CSNK1D-006 protein_coding Homo_sapiens 0 1570
ENST00000403276 CSNK1D-005 nonsense_mediated_decay Homo_sapiens 0 808
ENST00000577578 CSNK1D-028 processed_transcript Homo_sapiens 0 619
ENST00000578194 CSNK1D-019 processed_transcript Homo_sapiens 0 383
ENST00000578501 CSNK1D-025 retained_intron Homo_sapiens 0 736
ENST00000578904 CSNK1D-009 processed_transcript Homo_sapiens 0 852
ENST00000579308 CSNK1D-016 retained_intron Homo_sapiens 0 311
ENST00000579316 CSNK1D-014 retained_intron Homo_sapiens 0 527
ENST00000580061 CSNK1D-020 retained_intron Homo_sapiens 0 364
ENST00000580446 CSNK1D-015 protein_coding Homo_sapiens 0 636
ENST00000580565 CSNK1D-024 processed_transcript Homo_sapiens 0 344
ENST00000580784 CSNK1D-010 nonsense_mediated_decay Homo_sapiens 0 758
ENST00000581108 CSNK1D-023 retained_intron Homo_sapiens 0 473
ENST00000581241 CSNK1D-007 retained_intron Homo_sapiens 0 1055
ENST00000581660 CSNK1D-013 nonsense_mediated_decay Homo_sapiens 0 387
ENST00000581737 CSNK1D-026 retained_intron Homo_sapiens 0 357
ENST00000582844 CSNK1D-021 processed_transcript Homo_sapiens 0 1168
ENST00000584377 CSNK1D-008 retained_intron Homo_sapiens 0 1720
ENST00000584472 CSNK1D-012 processed_transcript Homo_sapiens 0 571
ENST00000584672 CSNK1D-027 nonsense_mediated_decay Homo_sapiens 9e-35 150
ENST00000584913 CSNK1D-029 processed_transcript Homo_sapiens 0 195
ENST00000585026 CSNK1D-017 nonsense_mediated_decay Homo_sapiens 0 344

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