C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000452_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000024314-ENSDARG00000030872 CGP 7955 18:17259807-17280994
GeneTranscriptPositionBiotype
ENSDARG00000024314 (herpud1)
homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 		ENSDART00000034287 (herpud1-201) 17259897-17267745 protein_coding
ENSDART00000129631 (herpud1-002) 17259929-17267739 nonsense_mediated_decay
ENSDART00000141465 (herpud1-003) 17260114-17264963 nonsense_mediated_decay
ENSDART00000151850 (herpud1-004) 17259807-17264956 protein_coding
ENSDART00000151934 (herpud1-001) 17259897-17267746 protein_coding
ENSDARG00000030872 (cetp)
cholesteryl ester transfer protein, plasma 		ENSDART00000046891 (cetp-001) 17270795-17280994 protein_coding
CIL_000452_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000051108-ENSG00000087237 CGP 9606 16:56932048-56983845
GeneTranscriptPositionBiotype
ENSG00000051108 (HERPUD1)
homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 		ENST00000300302 (HERPUD1-002) 56932147-56943881 protein_coding
ENST00000344114 (HERPUD1-004) 56932147-56943881 protein_coding
ENST00000379792 (HERPUD1-003) 56932160-56943886 protein_coding
ENST00000439977 (HERPUD1-001) 56932048-56944863 protein_coding
ENST00000562914 (HERPUD1-009) 56932142-56935554 retained_intron
ENST00000563343 (HERPUD1-013) 56933208-56939946 protein_coding
ENST00000563781 (HERPUD1-017) 56935378-56942202 processed_transcript
ENST00000563911 (HERPUD1-016) 56936724-56943557 protein_coding
ENST00000564678 (HERPUD1-007) 56935951-56943877 retained_intron
ENST00000565966 (HERPUD1-020) 56932147-56940047 nonsense_mediated_decay
ENST00000566550 (HERPUD1-011) 56934965-56935563 retained_intron
ENST00000567944 (HERPUD1-018) 56939144-56940113 retained_intron
ENST00000568358 (HERPUD1-019) 56935402-56943548 protein_coding
ENST00000568651 (HERPUD1-014) 56939249-56943297 protein_coding
ENST00000568676 (HERPUD1-010) 56932147-56935648 retained_intron
ENST00000568814 (HERPUD1-015) 56942011-56943407 processed_transcript
ENST00000569429 (HERPUD1-012) 56933184-56939992 protein_coding
ENST00000569569 (HERPUD1-005) 56932147-56937413 retained_intron
ENST00000570273 (HERPUD1-006) 56932148-56943599 processed_transcript
ENSG00000087237 (CETP)
cholesteryl ester transfer protein, plasma 		ENST00000200676 (CETP-001) 56961850-56983845 protein_coding
ENST00000379780 (CETP-002) 56961923-56983844 protein_coding
ENST00000566128 (CETP-003) 56962107-56983845 protein_coding
ENST00000569082 (CETP-004) 56961982-56973368 processed_transcript
ENSG00000261114 (RP11-325K4.2)
 ENST00000570210 (RP11-325K4.2-001) 56941028-56941726 sense_intronic
ENSG00000261270 (RP11-325K4.3)
 ENST00000565861 (RP11-325K4.3-001) 56940278-56941342 sense_intronic
ENSG00000263441 (AC012181.1)
 ENST00000585112 (AC012181.1-201) 56957265-56957361 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000452_0001ENSDARG00000024314ENSDART00000034287ENSDART00000129631ENSDART00000141465ENSDART00000151850ENSDART00000151934ENSDARG00000030872ENSDART00000046891CIL_000452_0002ENSG00000051108ENST00000300302ENST00000344114ENST00000379792ENST00000439977ENST00000562914ENST00000563343ENST00000563781ENST00000563911ENST00000564678ENST00000565966ENST00000566550ENST00000567944ENST00000568358ENST00000568651ENST00000568676ENST00000568814ENST00000569429ENST00000569569ENST00000570273ENSG00000087237ENST00000200676ENST00000379780ENST00000566128ENST00000569082ENSG00000261114ENST00000570210ENSG00000261270ENST00000565861ENSG00000263441ENST00000585112
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000452_0001ENSDARG00000024314ENSDART00000034287ENSDART00000129631ENSDART00000151850ENSDART00000151934ENSDARG00000030872ENSDART00000046891CIL_000452_0002ENSG00000051108ENST00000300302ENST00000379792ENST00000439977ENST00000563781ENST00000563911ENST00000564678ENST00000568814ENST00000569569ENST00000570273ENSG00000087237ENST00000200676ENST00000379780ENST00000569082ENSG00000261114ENST00000570210ENSG00000261270ENST00000565861ENSG00000263441ENST00000585112
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000024314 ENSDART00000034287 N/A N/A N/A 8.030±2.86 N/A N/A 6.687±1.13 19.454±0.00 N/A N/A 4.353±0.00 N/A N/A N/A
ENSDART00000129631 N/A N/A N/A 1.703±0.00 N/A N/A N/A 10.394±5.48 N/A N/A N/A N/A N/A N/A
ENSDART00000141465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151850 N/A N/A N/A 2.293±0.00 N/A N/A 4.388±0.00 N/A 1.008±0.00 N/A N/A N/A N/A N/A
ENSDART00000151934 N/A N/A N/A 4.815±2.29 N/A N/A 2.307±0.00 N/A 2.922±0.00 N/A 5.969±0.00 N/A N/A N/A
ENSDARG00000030872 ENSDART00000046891 N/A N/A N/A 0.423±0.23 N/A N/A 0.627±0.21 21.971±0.00 7.484±0.00 N/A 0.485±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000051108 ENST00000300302 14.351±0.00 N/A N/A 8.064±0.00 14.483±0.00 18.304±0.00 8.576±0.00 60.035±0.00 11.841±0.00 24.254±0.00 15.162±8.57 18.125±13.51 24.416±8.12 5.476±0.00
ENST00000344114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379792 9.385±0.00 22.628±0.00 2.097±0.00 9.947±6.18 24.206±0.00 13.224±8.66 17.287±0.00 37.966±30.69 13.729±0.00 54.969±0.00 22.285±0.00 12.650±2.30 21.382±3.35 18.470±0.00
ENST00000439977 N/A 9.111±0.00 1.988±0.00 2.167±0.00 N/A 4.430±0.00 1.123±0.00 N/A N/A N/A N/A 3.222±0.00 N/A N/A
ENST00000562914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563781 N/A N/A 6.891±0.00 N/A 12.607±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563911 N/A N/A N/A 3.673±0.00 N/A N/A N/A N/A N/A N/A N/A 13.184±0.00 21.760±0.00 12.747±0.00
ENST00000564678 N/A N/A N/A N/A 5.372±0.00 N/A 2.429±0.00 4.811±0.00 2.404±0.00 5.574±0.00 N/A 2.214±0.00 N/A N/A
ENST00000565966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 56.784±0.00 71.049±0.00 44.946±0.00
ENST00000569429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569569 N/A N/A N/A N/A 5.043±0.00 N/A N/A N/A N/A 4.290±0.00 N/A N/A N/A N/A
ENST00000570273 N/A N/A N/A N/A N/A N/A 9.843±0.00 5.289±0.00 N/A 38.509±0.00 21.857±0.00 26.605±0.00 28.418±4.30 8.102±0.00
ENSG00000087237 ENST00000200676 9.709±0.00 12.393±0.00 N/A 0.195±0.00 3.411±0.00 1.419±0.00 0.589±0.00 3.700±1.40 6.098±0.00 1.262±0.80 N/A 0.345±0.15 10.092±5.62 0.253±0.00
ENST00000379780 N/A 7.133±0.00 0.472±0.00 0.277±0.00 0.756±0.00 0.284±0.00 N/A N/A 0.578±0.39 0.541±0.00 N/A 0.143±0.00 4.000±0.72 0.177±0.00
ENST00000566128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569082 N/A N/A 0.281±0.00 0.135±0.00 N/A 0.077±0.00 0.277±0.00 N/A N/A N/A 0.182±0.00 N/A N/A N/A
ENSG00000261114 ENST00000570210 0.262±0.00 2.818±0.00 1.879±0.00 0.410±0.12 0.729±0.48 0.345±0.03 0.196±0.03 1.656±0.00 0.160±0.04 1.529±0.58 N/A 0.940±0.10 0.342±0.02 0.420±0.04
ENSG00000261270 ENST00000565861 0.531±0.00 2.686±0.00 2.144±0.00 0.305±0.12 0.728±0.12 0.672±0.27 0.305±0.18 1.463±0.00 0.261±0.16 2.280±0.81 0.622±0.00 0.530±0.02 0.111±0.00 0.307±0.02
ENSG00000263441 ENST00000585112 N/A N/A N/A 0.590±0.00 0.867±0.00 2.317±0.00 1.059±0.00 0.848±0.00 N/A N/A N/A N/A N/A 0.251±0.00

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