C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379792 HERPUD1-003 ENSG00000051108 9606 + 16:56932160-56943886 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379792
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379792 9.385±0.00 22.628±0.00 2.097±0.00 9.947±6.18 24.206±0.00 13.224±8.66 17.287±0.00 37.966±30.69 13.729±0.00 54.969±0.00 22.285±0.00 12.650±2.30 21.382±3.35 18.470±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000453 CIL_000453_0002 CGP 16:56865207-56944863
CIL_000452 CIL_000452_0002 CGP 16:56932048-56983845

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006986 IEP response to unfolded protein
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0016020 IDA membrane
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034220 Herpud1-002 protein_coding Mus_musculus 0 1066
ENSMUST00000161576 Herpud1-001 protein_coding Mus_musculus 0 1066
ENSMUST00000161085 Herpud1-003 processed_transcript Mus_musculus 0 632
ENSMUST00000159450 Herpud1-004 processed_transcript Mus_musculus 0 446
ENSMUST00000160866 Herpud1-005 retained_intron Mus_musculus 0 279

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