C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000300302 HERPUD1-002 ENSG00000051108 9606 + 16:56932147-56943881 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000300302
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000300302 14.351±0.00 8.064±0.00 14.483±0.00 18.304±0.00 8.576±0.00 60.035±0.00 11.841±0.00 24.254±0.00 15.162±8.57 18.125±13.51 24.416±8.12 5.476±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000453 CIL_000453_0002 CGP 16:56865207-56944863
CIL_000452 CIL_000452_0002 CGP 16:56932048-56983845

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006986 IEP response to unfolded protein
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0016020 IDA membrane
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034220 Herpud1-002 protein_coding Mus_musculus 0 1424
ENSMUST00000161576 Herpud1-001 protein_coding Mus_musculus 0 1410
ENSMUST00000161085 Herpud1-003 processed_transcript Mus_musculus 0 791
ENSMUST00000159450 Herpud1-004 processed_transcript Mus_musculus 0 604
ENSMUST00000160866 Herpud1-005 retained_intron Mus_musculus 0 279

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