C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439977 HERPUD1-001 ENSG00000051108 9606 + 16:56932048-56944863 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartOvaryENST00000439977
Transcript ID Adrenal Bladder Brain Colon Heart Ovary
ENST00000439977 9.111±0.00 1.988±0.00 2.167±0.00 4.430±0.00 1.123±0.00 3.222±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000453 CIL_000453_0002 CGP 16:56865207-56944863
CIL_000452 CIL_000452_0002 CGP 16:56932048-56983845

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0006874 IEA cellular calcium ion homeostasis
GO:0006986 IEP response to unfolded protein
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0031396 IEA regulation of protein ubiquitination
GO:0032092 IEA positive regulation of protein binding
GO:0043154 IEA negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161576 Herpud1-001 protein_coding Mus_musculus 0 1452
ENSMUST00000034220 Herpud1-002 protein_coding Mus_musculus 0 1410
ENSMUST00000161085 Herpud1-003 processed_transcript Mus_musculus 0 811
ENSMUST00000159450 Herpud1-004 processed_transcript Mus_musculus 0 625
ENSMUST00000160866 Herpud1-005 retained_intron Mus_musculus 0 279

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