C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kinesin family member 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498729 KIF1A-201 ENSG00000130294 9606 - 2:240713764-240820308 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLiverLungENST00000498729
Transcript ID Colon Heart Liver Lung
ENST00000498729 0.512±0.00 0.108±0.00 0.089±0.00 0.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003K7 CIL_0003K7_0001 CGP 2:240691845-240820308
CIL_00046R CIL_00046R_0001 CGP 2:240713764-240880502

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 TAS motor activity
GO:0003777 IEA microtubule motor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005871 IEA:IBA kinesin complex
GO:0005874 IEA microtubule
GO:0006200 IBA ATP catabolic process
GO:0007018 IEA:IBA microtubule-based movement
GO:0008017 IEA microtubule binding
GO:0008089 TAS anterograde axon cargo transport
GO:0008152 IEA:IBA metabolic process
GO:0008219 IEA cell death
GO:0008574 IBA plus-end-directed microtubule motor activity
GO:0016192 IBA vesicle-mediated transport
GO:0016887 IBA ATPase activity
GO:0030705 IBA cytoskeleton-dependent intracellular transport
GO:0043005 IEA neuron projection
GO:0043025 IEA neuronal cell body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000190723 Kif1a-003 protein_coding Mus_musculus 0 7075
ENSMUST00000086819 Kif1a-005 protein_coding Mus_musculus 0 3439
ENSMUST00000171556 Kif1a-002 protein_coding Mus_musculus 0 3225
ENSMUST00000112958 Kif1a-006 protein_coding Mus_musculus 0 3225
ENSMUST00000171796 Kif1a-001 protein_coding Mus_musculus 0 3225
ENSMUST00000186861 Kif1a-007 protein_coding Mus_musculus 0 462
ENSMUST00000186828 Kif1a-010 nonsense_mediated_decay Mus_musculus 0 433
ENSMUST00000188493 Kif1a-008 processed_transcript Mus_musculus 0 329
ENSMUST00000072187 Kif1c-004 protein_coding Mus_musculus 0 324
ENSMUST00000137119 Kif1c-005 protein_coding Mus_musculus 0 322
ENSMUST00000094499 Kif1c-002 protein_coding Mus_musculus 0 322
ENSMUST00000102554 Kif1c-001 protein_coding Mus_musculus 0 322
ENSMUST00000190249 Kif1a-009 processed_transcript Mus_musculus 0 265

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