C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00049S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000009031-ENSDARG00000057125 CGP 7955 24:27285667-27511823
GeneTranscriptPositionBiotype
ENSDARG00000009031 (tnikb)
TRAF2 and NCK interacting kinase b 		ENSDART00000008374 (tnikb-002) 27288506-27428773 protein_coding
ENSDART00000017384 (tnikb-001) 27337983-27428784 protein_coding
ENSDART00000097792 (tnikb-201) 27285667-27428521 protein_coding
ENSDART00000138089 (tnikb-003) 27305490-27331256 processed_transcript
ENSDARG00000057125 (pld1b)
phospholipase D1b 		ENSDART00000079726 (pld1b-201) 27458582-27511823 protein_coding
ENSDART00000124580 (pld1b-001) 27501479-27511811 protein_coding
ENSDARG00000092049 (si:dkey-70n11.1)
si:dkey-70n11.1 		ENSDART00000137129 (si:dkey-70n11.1-001) 27438501-27444625 processed_pseudogene
CIL_00049S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154310-ENSG00000075651 CGP 9606 3:171061339-171810950
GeneTranscriptPositionBiotype
ENSG00000075651 (PLD1)
phospholipase D1, phosphatidylcholine-specific 		ENST00000331659 (PLD1-201) 171791790-171809924 protein_coding
ENST00000351298 (PLD1-001) 171600826-171810494 protein_coding
ENST00000356327 (PLD1-002) 171600405-171810438 protein_coding
ENST00000418087 (PLD1-010) 171735501-171771359 protein_coding
ENST00000440204 (PLD1-011) 171726004-171810462 nonsense_mediated_decay
ENST00000446289 (PLD1-003) 171611466-171674516 protein_coding
ENST00000460926 (PLD1-007) 171788567-171810441 processed_transcript
ENST00000463281 (PLD1-017) 171600405-171602338 processed_transcript
ENST00000465816 (PLD1-014) 171612279-171666305 processed_transcript
ENST00000467432 (PLD1-015) 171612307-171643154 retained_intron
ENST00000471075 (PLD1-004) 171653242-171677853 retained_intron
ENST00000475273 (PLD1-016) 171721354-171737932 processed_transcript
ENST00000481505 (PLD1-013) 171688695-171708870 retained_intron
ENST00000489995 (PLD1-009) 171765129-171771385 processed_transcript
ENST00000497307 (PLD1-006) 171788581-171810950 processed_transcript
ENST00000498278 (PLD1-012) 171713878-171810437 retained_intron
ENSG00000154310 (TNIK)
TRAF2 and NCK interacting kinase 		ENST00000284483 (TNIK-004) 171063881-171460063 protein_coding
ENST00000341852 (TNIK-003) 171063330-171460408 protein_coding
ENST00000357327 (TNIK-006) 171063881-171460063 protein_coding
ENST00000436636 (TNIK-001) 171061339-171460408 protein_coding
ENST00000459881 (TNIK-017) 171066487-171071406 retained_intron
ENST00000460047 (TNIK-007) 171063881-171460063 protein_coding
ENST00000464785 (TNIK-016) 171063552-171064042 processed_transcript
ENST00000465393 (TNIK-002) 171346934-171460405 protein_coding
ENST00000468757 (TNIK-012) 171157551-171225711 protein_coding
ENST00000470834 (TNIK-009) 171063881-171460063 protein_coding
ENST00000475336 (TNIK-005) 171063881-171460063 protein_coding
ENST00000484051 (TNIK-011) 171066374-171082682 retained_intron
ENST00000487846 (TNIK-015) 171066470-171079583 retained_intron
ENST00000488470 (TNIK-008) 171063881-171460063 protein_coding
ENST00000496492 (TNIK-010) 171063261-171102072 retained_intron
ENSG00000222506 (Y_RNA)
Y RNA 		ENST00000410574 (Y_RNA.1-806) 171439526-171439627 misc_RNA
ENSG00000234594 (RP11-263C16.2)
 ENST00000420943 (RP11-263C16.2-001) 171534423-171534615 processed_pseudogene
ENSG00000240497 (RP11-185E8.1)
 ENST00000467896 (RP11-185E8.1-001) 171468084-171469633 lincRNA
ENSG00000279673 (RP11-185E8.2)
 ENST00000623631 (RP11-185E8.2-001) 171460612-171462256 TEC

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049S_0001ENSDARG00000009031ENSDART00000008374ENSDART00000017384ENSDART00000097792ENSDART00000138089ENSDARG00000057125ENSDART00000079726ENSDART00000124580ENSDARG00000092049ENSDART00000137129CIL_00049S_0002ENSG00000075651ENST00000331659ENST00000351298ENST00000356327ENST00000418087ENST00000440204ENST00000446289ENST00000460926ENST00000463281ENST00000465816ENST00000467432ENST00000471075ENST00000475273ENST00000481505ENST00000489995ENST00000497307ENST00000498278ENSG00000154310ENST00000284483ENST00000341852ENST00000357327ENST00000436636ENST00000459881ENST00000460047ENST00000464785ENST00000465393ENST00000468757ENST00000470834ENST00000475336ENST00000484051ENST00000487846ENST00000488470ENST00000496492ENSG00000222506ENST00000410574ENSG00000234594ENST00000420943ENSG00000240497ENST00000467896ENSG00000279673ENST00000623631
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049S_0001ENSDARG00000009031ENSDART00000008374ENSDART00000017384ENSDART00000097792ENSDARG00000057125ENSDART00000079726ENSDART00000124580ENSDARG00000092049ENSDART00000137129CIL_00049S_0002ENSG00000075651ENST00000331659ENST00000351298ENST00000356327ENST00000440204ENST00000460926ENST00000465816ENSG00000154310ENST00000284483ENST00000341852ENST00000357327ENST00000436636ENST00000468757ENST00000470834ENST00000475336ENST00000496492ENSG00000222506ENST00000410574ENSG00000234594ENST00000420943ENSG00000240497ENST00000467896ENSG00000279673ENST00000623631
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009031 ENSDART00000008374 N/A N/A N/A 6.243±2.25 N/A N/A 0.668±0.60 3.610±1.36 N/A N/A 0.829±0.00 N/A N/A N/A
ENSDART00000017384 N/A N/A N/A N/A N/A N/A 0.433±0.00 2.866±0.00 0.095±0.00 N/A N/A N/A N/A N/A
ENSDART00000097792 N/A N/A N/A 3.891±0.00 N/A N/A 0.536±0.00 0.358±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000138089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000057125 ENSDART00000079726 N/A N/A N/A 2.409±1.52 N/A N/A 0.377±0.07 1.994±0.42 0.199±0.00 N/A 0.436±0.00 N/A N/A N/A
ENSDART00000124580 N/A N/A N/A N/A N/A N/A 0.770±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000092049 ENSDART00000137129 N/A N/A N/A 0.094±0.00 N/A N/A 0.081±0.00 0.087±0.00 0.782±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075651 ENST00000331659 0.096±0.00 0.143±0.00 0.076±0.00 0.155±0.02 0.784±0.77 0.564±0.51 0.024±0.00 0.016±0.00 0.222±0.00 0.150±0.00 N/A 0.380±0.26 0.042±0.04 0.101±0.06
ENST00000351298 3.061±0.00 1.528±0.00 N/A 1.537±0.52 1.927±0.67 2.020±0.35 3.809±1.75 2.641±1.55 1.313±0.64 1.416±0.06 0.185±0.15 2.237±1.05 1.612±0.23 1.528±1.10
ENST00000356327 1.005±0.00 N/A N/A 0.671±0.31 3.601±0.00 0.893±0.00 N/A N/A N/A N/A N/A 1.954±1.25 1.147±0.31 0.911±0.00
ENST00000418087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.101±0.00 N/A N/A N/A
ENST00000446289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460926 N/A N/A N/A 2.974±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.492±0.00 N/A N/A N/A
ENST00000467432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154310 ENST00000284483 N/A N/A N/A 2.771±0.00 N/A N/A N/A N/A N/A N/A 0.935±0.00 N/A N/A N/A
ENST00000341852 N/A N/A 0.377±0.00 N/A N/A 0.795±0.00 N/A N/A N/A N/A 1.629±0.00 0.254±0.06 N/A N/A
ENST00000357327 N/A N/A 0.625±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.624±0.00 N/A
ENST00000436636 0.238±0.00 1.148±0.00 N/A 7.614±0.77 1.150±0.62 2.273±0.02 1.470±0.28 2.193±0.00 1.810±0.32 2.037±0.52 1.587±0.11 0.320±0.18 0.528±0.05 4.960±0.55
ENST00000459881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468757 N/A N/A 2.205±0.00 N/A N/A N/A N/A N/A 2.896±0.00 N/A N/A N/A N/A N/A
ENST00000470834 0.111±0.00 N/A N/A N/A 0.860±0.00 N/A N/A N/A N/A 1.009±0.00 N/A 0.281±0.01 0.251±0.00 N/A
ENST00000475336 N/A N/A 0.704±0.00 N/A N/A N/A N/A 1.261±0.00 N/A N/A N/A N/A 0.230±0.00 3.188±0.00
ENST00000484051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496492 N/A N/A N/A N/A 1.403±0.00 2.187±0.00 0.991±0.00 N/A 1.520±0.00 2.738±0.00 N/A N/A N/A 2.926±0.00
ENSG00000222506 ENST00000410574 N/A N/A N/A N/A N/A N/A 0.305±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000234594 ENST00000420943 N/A N/A N/A 0.357±0.00 0.243±0.00 0.152±0.00 1.572±0.00 N/A 0.357±0.00 0.339±0.00 0.528±0.00 N/A N/A N/A
ENSG00000240497 ENST00000467896 N/A N/A N/A 0.132±0.00 N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 0.100±0.00 0.106±0.01
ENSG00000279673 ENST00000623631 N/A 0.554±0.00 N/A 0.381±0.07 0.160±0.04 0.168±0.00 0.118±0.00 0.124±0.10 0.246±0.02 0.085±0.00 0.111±0.00 0.171±0.06 0.205±0.14 0.241±0.06

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