C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004CV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188038-ENSG00000159792 CGP 9606 16:67884805-67929678
GeneTranscriptPositionBiotype
ENSG00000159792 (PSKH1)
protein serine kinase H1 		ENST00000291041 (PSKH1-001) 67893272-67929678 protein_coding
ENST00000570631 (PSKH1-002) 67893272-67910088 protein_coding
ENST00000575198 (PSKH1-003) 67893301-67903145 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0004CV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044287-ENSMUSG00000048310 CGP 10090 8:105893567-105931778
GeneTranscriptPositionBiotype
ENSMUSG00000036270 (Edc4)
enhancer of mRNA decapping 4 		ENSMUST00000040254 (Edc4-001) 105880881-105893225 protein_coding
ENSMUST00000119261 (Edc4-002) 105880951-105893208 protein_coding
ENSMUST00000132680 (Edc4-006) 105887378-105889532 protein_coding
ENSMUST00000136048 (Edc4-003) 105881077-105894908 nonsense_mediated_decay
ENSMUST00000139154 (Edc4-004) 105886969-105888145 retained_intron
ENSMUST00000145618 (Edc4-005) 105887392-105888713 protein_coding
ENSMUST00000156357 (Edc4-007) 105890268-105891328 retained_intron
ENSMUSG00000048310 (Pskh1)
protein serine kinase H1 		ENSMUST00000049699 (Pskh1-001) 105900441-105931778 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004CV_0001ENSG00000159792ENST00000291041ENST00000570631ENST00000575198CIL_0004CV_0002ENSMUSG00000036270ENSMUST00000040254ENSMUST00000119261ENSMUST00000132680ENSMUST00000136048ENSMUST00000139154ENSMUST00000145618ENSMUST00000156357ENSMUSG00000048310ENSMUST00000049699
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004CV_0001ENSG00000159792ENST00000291041ENST00000570631CIL_0004CV_0002ENSMUSG00000036270ENSMUST00000040254ENSMUST00000119261ENSMUST00000132680ENSMUSG00000048310ENSMUST00000049699
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000159792 ENST00000291041 8.686±0.00 12.173±0.00 1.318±0.00 2.216±1.70 7.431±6.88 5.933±0.00 6.418±0.00 7.248±5.47 9.551±0.00 3.391±2.73 2.176±1.68 10.157±8.44 6.878±0.62 14.756±2.46
ENST00000570631 N/A N/A N/A N/A N/A 1.094±0.00 0.314±0.00 N/A N/A 1.280±0.00 N/A 0.496±0.00 N/A N/A
ENST00000575198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036270 ENSMUST00000040254 11.776±4.26 12.908±1.93 9.456±0.72 13.635±3.54 14.883±2.31 13.473±2.94 8.642±4.17 8.369±2.40 5.940±2.55 16.861±2.68 4.093±1.03 17.471±5.26 8.928±1.44 20.244±7.08
ENSMUST00000119261 3.885±0.71 6.140±1.77 1.587±0.00 4.041±0.07 5.413±1.13 3.943±0.37 1.868±0.19 2.808±1.37 2.433±1.09 4.213±0.57 1.339±0.62 8.361±2.70 2.922±1.47 4.071±1.69
ENSMUST00000132680 N/A 10.861±1.54 N/A N/A 10.844±0.00 10.860±0.99 N/A N/A 3.569±0.12 N/A N/A 19.946±2.51 N/A N/A
ENSMUST00000136048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000048310 ENSMUST00000049699 17.826±3.73 26.593±0.80 12.693±2.79 6.785±4.05 23.058±2.87 16.777±1.40 10.659±0.12 18.884±2.11 12.946±3.69 16.546±4.65 6.109±0.34 30.779±10.93 11.228±5.43 6.301±2.89

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