C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | enhancer of mRNA decapping 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000136048  |
Edc4-003 |
ENSMUSG00000036270 |
10090 | + |
8:105881077-105894908  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007FS | CIL_0007FS_0002 | CGP | 8:105860634-105894908 |
| CIL_0007FU | CIL_0007FU_0002 | CGP | 8:105880881-105895023 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000932 | ISO | cytoplasmic mRNA processing body |
| GO:0005515 | IPI | protein binding |
| GO:0008150 | ND | biological_process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000358933
|
EDC4-001 | protein_coding | Homo_sapiens | 0 | 2032 |
|
ENST00000536072
|
EDC4-003 | retained_intron | Homo_sapiens | 0 | 1066 |
|
ENST00000572031
|
EDC4-007 | retained_intron | Homo_sapiens | 0 | 638 |
|
ENST00000572221
|
EDC4-002 | retained_intron | Homo_sapiens | 0 | 2032 |
|
ENST00000573985
|
EDC4-015 | protein_coding | Homo_sapiens | 1e-34 | 150 |
|
ENST00000573992
|
EDC4-004 | retained_intron | Homo_sapiens | 0 | 2032 |
|
ENST00000574770
|
EDC4-005 | processed_transcript | Homo_sapiens | 0 | 379 |
|
ENST00000575033
|
EDC4-013 | protein_coding | Homo_sapiens | 0 | 411 |
|
ENST00000575507
|
EDC4-012 | retained_intron | Homo_sapiens | 0 | 647 |
|
ENST00000575514
|
EDC4-011 | retained_intron | Homo_sapiens | 0 | 652 |
|
ENST00000576972
|
EDC4-010 | retained_intron | Homo_sapiens | 0 | 525 |
|
ENST00000577105
|
EDC4-014 | protein_coding | Homo_sapiens | 0 | 414 |
