C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: beta-2 microglobulin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102476 B2m-001 ENSMUSG00000060802 10090 + 2:122147686-122153083 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102476
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102476 1282.028±410.99 1355.892±133.95 356.093±15.47 12.911±5.85 1588.861±583.88 584.213±64.99 229.822±98.90 444.797±71.23 976.003±767.96 874.900±409.36 56.827±13.59 309.283±100.95 178.765±90.74 54.589±48.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DJ CIL_0004DJ_0002 CGP 2:122053520-122186189
CIL_0004DK CIL_0004DK_0002 CGP 2:122120108-122186189
CIL_0004DL CIL_0004DL_0002 CGP 2:122147686-122179027

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001895 IEA retina homeostasis
GO:0001916 IMP positive regulation of T cell mediated cytotoxicity
GO:0002237 IMP response to molecule of bacterial origin
GO:0002474 IEA antigen processing and presentation of peptide antigen via MHC class I
GO:0002481 IMP antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0005925 IEA focal adhesion
GO:0006968 TAS cellular defense response
GO:0009897 IDA external side of plasma membrane
GO:0016020 IEA membrane
GO:0030670 TAS phagocytic vesicle membrane
GO:0033077 IGI T cell differentiation in thymus
GO:0042026 IDA protein refolding
GO:0042493 IEA response to drug
GO:0042612 IEA MHC class I protein complex
GO:0042802 IEA identical protein binding
GO:0046686 IEA response to cadmium ion
GO:0055072 IMP iron ion homeostasis
GO:0070062 IEA extracellular vesicular exosome

Homologs

No Homologs available.

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