C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004J0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103042-ENSG00000125166 CGP 9606 16:58665109-58734357
GeneTranscriptPositionBiotype
ENSG00000103042 (SLC38A7)
solute carrier family 38, member 7 		ENST00000219320 (SLC38A7-001) 58665109-58685104 protein_coding
ENST00000562149 (SLC38A7-003) 58671572-58684743 retained_intron
ENST00000562397 (SLC38A7-015) 58678743-58684743 protein_coding
ENST00000563196 (SLC38A7-016) 58678881-58684770 protein_coding
ENST00000564010 (SLC38A7-002) 58667362-58684770 protein_coding
ENST00000564100 (SLC38A7-005) 58666372-58684707 protein_coding
ENST00000564391 (SLC38A7-014) 58679610-58684053 protein_coding
ENST00000564720 (SLC38A7-011) 58681388-58684770 retained_intron
ENST00000564964 (SLC38A7-012) 58683666-58684770 retained_intron
ENST00000565785 (SLC38A7-008) 58672096-58678763 nonsense_mediated_decay
ENST00000566598 (SLC38A7-006) 58667278-58684181 nonsense_mediated_decay
ENST00000566953 (SLC38A7-009) 58667383-58684110 processed_transcript
ENST00000567930 (SLC38A7-013) 58681516-58684323 processed_transcript
ENST00000569209 (SLC38A7-007) 58672030-58677577 retained_intron
ENST00000570101 (SLC38A7-004) 58665109-58684723 protein_coding
ENST00000570214 (SLC38A7-010) 58675944-58684770 protein_coding
ENSG00000125166 (GOT2)
glutamic-oxaloacetic transaminase 2, mitochondrial 		ENST00000245206 (GOT2-001) 58707131-58734357 protein_coding
ENST00000434819 (GOT2-005) 58707818-58734326 protein_coding
ENST00000492378 (GOT2-002) 58721645-58734335 retained_intron
ENST00000494627 (GOT2-004) 58709049-58716383 retained_intron
ENST00000496461 (GOT2-003) 58718217-58734302 retained_intron
ENST00000564400 (GOT2-009) 58716013-58734342 processed_transcript
ENST00000568368 (GOT2-010) 58718570-58734316 nonsense_mediated_decay
ENSG00000279889 (RP11-451N19.3)
 ENST00000625197 (RP11-451N19.3-001) 58705799-58706297 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0004J0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036534-ENSMUSG00000031672 CGP 10090 8:95835920-95888547
GeneTranscriptPositionBiotype
ENSMUSG00000031672 (Got2)
glutamatic-oxaloacetic transaminase 2, mitochondrial 		ENSMUST00000034097 (Got2-001) 95864134-95888547 protein_coding
ENSMUST00000147040 (Got2-002) 95866832-95872392 processed_transcript
ENSMUSG00000036534 (Slc38a7)
solute carrier family 38, member 7 		ENSMUST00000040481 (Slc38a7-001) 95835920-95853539 protein_coding
ENSMUST00000142881 (Slc38a7-003) 95839901-95841679 retained_intron
ENSMUST00000153835 (Slc38a7-002) 95841878-95843853 retained_intron

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004J0_0001ENSG00000103042ENST00000219320ENST00000562149ENST00000562397ENST00000563196ENST00000564010ENST00000564100ENST00000564391ENST00000564720ENST00000564964ENST00000565785ENST00000566598ENST00000566953ENST00000567930ENST00000569209ENST00000570101ENST00000570214ENSG00000125166ENST00000245206ENST00000434819ENST00000492378ENST00000494627ENST00000496461ENST00000564400ENST00000568368ENSG00000279889ENST00000625197CIL_0004J0_0002ENSMUSG00000031672ENSMUST00000034097ENSMUST00000147040ENSMUSG00000036534ENSMUST00000040481ENSMUST00000142881ENSMUST00000153835
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004J0_0001ENSG00000103042ENST00000219320ENST00000562149ENST00000562397ENST00000563196ENST00000564010ENST00000564100ENST00000564720ENST00000564964ENST00000566953ENST00000567930ENST00000570101ENSG00000125166ENST00000245206ENST00000434819ENST00000564400ENSG00000279889ENST00000625197CIL_0004J0_0002ENSMUSG00000031672ENSMUST00000034097ENSMUSG00000036534ENSMUST00000040481
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103042 ENST00000219320 N/A N/A N/A N/A 0.536±0.00 N/A 1.863±0.00 N/A 1.263±0.00 0.517±0.00 1.403±0.00 0.854±0.53 2.975±0.51 N/A
ENST00000562149 N/A N/A 0.334±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.990±0.00
ENST00000562397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.063±0.00 17.906±0.00
ENST00000563196 N/A N/A N/A N/A N/A N/A N/A 0.701±0.00 N/A 1.427±0.00 N/A N/A N/A N/A
ENST00000564010 N/A N/A 1.013±0.00 N/A 0.550±0.00 N/A N/A N/A 0.967±0.00 N/A 1.653±0.00 N/A N/A N/A
ENST00000564100 N/A N/A N/A N/A N/A 0.199±0.00 N/A N/A N/A N/A N/A N/A N/A 4.043±0.97
ENST00000564391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564720 N/A N/A 1.383±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564964 N/A N/A N/A 2.150±0.00 N/A 0.889±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.337±0.00 N/A N/A N/A
ENST00000567930 N/A N/A N/A N/A N/A 1.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570101 1.436±0.00 1.501±0.00 N/A 1.031±0.00 0.508±0.32 1.013±0.00 1.691±1.08 0.763±0.00 0.361±0.00 0.208±0.00 N/A 1.119±0.00 1.225±0.12 4.021±1.25
ENST00000570214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000125166 ENST00000245206 17.748±0.00 25.861±0.00 4.755±0.00 28.383±6.16 8.643±6.00 16.157±7.26 55.980±39.94 22.425±5.44 42.870±37.50 6.700±4.39 52.461±25.67 22.314±11.35 18.174±4.70 23.722±6.89
ENST00000434819 N/A N/A 1.934±0.00 N/A 4.551±0.00 N/A 5.428±0.00 12.370±0.00 N/A N/A N/A 2.713±0.00 N/A N/A
ENST00000492378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564400 N/A N/A N/A N/A 5.850±0.00 N/A 7.168±0.00 N/A N/A 1.698±0.00 N/A 6.844±0.00 N/A N/A
ENST00000568368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279889 ENST00000625197 N/A N/A N/A 0.143±0.00 N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A 0.245±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031672 ENSMUST00000034097 17.122±4.56 56.316±1.38 39.992±4.39 38.163±0.51 30.124±12.53 27.893±1.66 158.774±14.32 68.385±21.81 98.914±16.63 21.636±4.53 126.551±13.04 41.732±7.83 71.619±34.19 2.987±1.26
ENSMUST00000147040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000036534 ENSMUST00000040481 8.530±0.88 10.200±3.40 4.672±1.73 7.662±3.34 6.806±2.70 7.349±1.61 5.209±0.80 8.510±0.58 6.209±2.93 7.638±1.08 1.977±0.46 9.739±3.99 13.989±8.58 1.021±0.47
ENSMUST00000142881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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