C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamatic-oxaloacetic transaminase 2, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034097 Got2-001 ENSMUSG00000031672 10090 - 8:95864134-95888547 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034097
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034097 17.122±4.56 56.316±1.38 39.992±4.39 38.163±0.51 30.124±12.53 27.893±1.66 158.774±14.32 68.385±21.81 98.914±16.63 21.636±4.53 126.551±13.04 41.732±7.83 71.619±34.19 2.987±1.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004J0 CIL_0004J0_0002 CGP 8:95835920-95888547

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004069 ISS L-aspartate:2-oxoglutarate aminotransferase activity
GO:0005739 ISS mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005886 IEA plasma membrane
GO:0006103 ISS 2-oxoglutarate metabolic process
GO:0006107 IDA oxaloacetate metabolic process
GO:0006531 ISS aspartate metabolic process
GO:0006532 IDA aspartate biosynthetic process
GO:0006533 IEA aspartate catabolic process
GO:0006536 ISS glutamate metabolic process
GO:0015908 IEA fatty acid transport
GO:0016212 IEA kynurenine-oxoglutarate transaminase activity
GO:0019550 IDA glutamate catabolic process to aspartate
GO:0019551 IDA glutamate catabolic process to 2-oxoglutarate
GO:0030170 IEA pyridoxal phosphate binding
GO:0044822 IEA poly(A) RNA binding
GO:0045471 IEA response to ethanol
GO:0070062 IEA extracellular vesicular exosome
GO:0080130 IEA L-phenylalanine:2-oxoglutarate aminotransferase activity
GO:0097052 IEA L-kynurenine metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245206 GOT2-001 protein_coding Homo_sapiens 0 1639
ENST00000398901 RP11-54I5.1-001 processed_pseudogene Homo_sapiens 0 1024
ENST00000426641 GOT2P3-001 transcribed_processed_pseudogene Homo_sapiens 0 1184
ENST00000434819 GOT2-005 protein_coding Homo_sapiens 0 1166
ENST00000450663 GOT2P2-001 processed_pseudogene Homo_sapiens 0 1122
ENST00000492378 GOT2-002 retained_intron Homo_sapiens 0 475
ENST00000496461 GOT2-003 retained_intron Homo_sapiens 0 769
ENST00000540992 RP11-424M22.1-001 processed_pseudogene Homo_sapiens 0 752
ENST00000564400 GOT2-009 processed_transcript Homo_sapiens 0 880
ENST00000568368 GOT2-010 nonsense_mediated_decay Homo_sapiens 0 261

Loading