C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004KV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000051761-ENSDARG00000078600 CGP 7955 25:38250200-38263194
GeneTranscriptPositionBiotype
ENSDARG00000051761 (trim44)
tripartite motif-containing 44 		ENSDART00000073439 (trim44-001) 38250200-38255612 protein_coding
ENSDART00000148609 (trim44-002) 38253435-38253939 retained_intron
ENSDARG00000078600 (ldlrad3)
low density lipoprotein receptor class A domain containing 3 		ENSDART00000111862 (ldlrad3-001) 38256735-38263194 protein_coding
ENSDARG00000097721 (si:dkey-234i14.21)
si:dkey-234i14.21 		ENSDART00000154227 (si:dkey-234i14.21-001) 38251105-38257120 lincRNA
CIL_0004KV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166326-ENSG00000179241 CGP 9606 11:35662805-36232136
GeneTranscriptPositionBiotype
ENSG00000166326 (TRIM44)
tripartite motif containing 44 		ENST00000299413 (TRIM44-001) 35662805-35818007 protein_coding
ENST00000532066 (TRIM44-002) 35724256-35806621 processed_transcript
ENSG00000179241 (LDLRAD3)
low density lipoprotein receptor class A domain containing 3 		ENST00000315571 (LDLRAD3-001) 35944078-36232136 protein_coding
ENST00000524419 (LDLRAD3-003) 35943981-36230267 protein_coding
ENST00000528989 (LDLRAD3-002) 35943981-36230267 protein_coding
ENST00000529759 (LDLRAD3-006) 36163299-36227429 processed_transcript
ENST00000532490 (LDLRAD3-004) 35944099-36229313 processed_transcript
ENST00000534091 (LDLRAD3-005) 36109925-36229211 processed_transcript
ENSG00000186082 (KRT18P14)
keratin 18 pseudogene 14 		ENST00000534205 (KRT18P14-001) 35860249-35861498 processed_pseudogene
ENSG00000241228 (RP5-916O11.1)
 ENST00000478433 (RP5-916O11.1-001) 35997226-35997675 processed_pseudogene
ENSG00000254672 (RP5-916O11.3)
 ENST00000529830 (RP5-916O11.3-001) 35967010-35968676 processed_pseudogene
ENSG00000254919 (RP11-698N11.2)
 ENST00000525363 (RP11-698N11.2-002) 35917667-35918739 antisense
ENST00000531569 (RP11-698N11.2-001) 35915051-35918718 antisense
ENSG00000255256 (RP5-916O11.2)
 ENST00000534594 (RP5-916O11.2-001) 35972428-35989007 sense_intronic
ENSG00000280321 (RP11-1110F20.1)
 ENST00000623261 (RP11-1110F20.1-001) 36196248-36197901 TEC

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004KV_0001ENSDARG00000051761ENSDART00000073439ENSDART00000148609ENSDARG00000078600ENSDART00000111862ENSDARG00000097721ENSDART00000154227CIL_0004KV_0002ENSG00000166326ENST00000299413ENST00000532066ENSG00000179241ENST00000315571ENST00000524419ENST00000528989ENST00000529759ENST00000532490ENST00000534091ENSG00000186082ENST00000534205ENSG00000241228ENST00000478433ENSG00000254672ENST00000529830ENSG00000254919ENST00000525363ENST00000531569ENSG00000255256ENST00000534594ENSG00000280321ENST00000623261
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004KV_0001ENSDARG00000051761ENSDART00000073439ENSDARG00000078600ENSDART00000111862ENSDARG00000097721ENSDART00000154227CIL_0004KV_0002ENSG00000166326ENST00000299413ENSG00000179241ENST00000315571ENST00000524419ENST00000528989ENST00000529759ENST00000532490ENSG00000186082ENST00000534205ENSG00000241228ENST00000478433ENSG00000254672ENST00000529830ENSG00000254919ENST00000525363ENST00000531569ENSG00000255256ENST00000534594ENSG00000280321ENST00000623261
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000051761 ENSDART00000073439 N/A N/A N/A 6.917±3.70 N/A N/A 3.939±1.79 11.119±6.35 N/A N/A N/A N/A N/A N/A
ENSDART00000148609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000078600 ENSDART00000111862 N/A N/A N/A 2.739±0.00 N/A N/A N/A N/A 1.492±0.00 N/A N/A N/A N/A N/A
ENSDARG00000097721 ENSDART00000154227 N/A N/A N/A 4.834±1.19 N/A N/A 11.307±5.88 5.752±3.55 0.454±0.00 N/A 4.702±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166326 ENST00000299413 2.172±0.00 6.576±0.00 2.236±0.00 12.947±0.00 4.598±1.08 1.861±0.39 1.003±0.00 2.572±0.58 3.285±0.46 1.293±0.67 1.483±1.19 4.481±2.08 5.126±5.61 5.619±0.58
ENST00000532066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000179241 ENST00000315571 12.602±0.00 4.323±0.00 N/A 5.829±0.00 5.946±0.00 4.164±0.00 1.044±0.00 0.304±0.19 0.507±0.01 2.783±0.00 2.764±0.00 3.446±2.67 0.750±0.31 2.932±2.20
ENST00000524419 N/A N/A N/A 0.287±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.668±0.00
ENST00000528989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.167±0.00 0.908±0.00 N/A N/A
ENST00000529759 N/A N/A 0.609±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532490 N/A N/A N/A N/A N/A 1.178±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186082 ENST00000534205 0.014±0.00 N/A N/A 0.023±0.00 0.017±0.00 N/A N/A 0.016±0.00 0.014±0.00 0.016±0.00 N/A N/A N/A N/A
ENSG00000241228 ENST00000478433 N/A 0.191±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254672 ENST00000529830 0.023±0.00 0.024±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254919 ENST00000525363 0.090±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531569 N/A N/A N/A 0.200±0.17 0.159±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255256 ENST00000534594 0.085±0.00 0.183±0.00 N/A 0.101±0.00 0.168±0.00 0.018±0.00 0.113±0.00 0.039±0.00 N/A 0.059±0.04 0.161±0.00 0.094±0.02 N/A 0.075±0.00
ENSG00000280321 ENST00000623261 N/A 0.015±0.00 N/A N/A 0.108±0.10 0.071±0.02 0.047±0.01 N/A 0.049±0.03 0.089±0.06 0.094±0.00 0.134±0.18 0.023±0.00 0.040±0.02

Loading