C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004NO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000000568-ENSDARG00000001734 CGP 7955 22:21167801-21270794
GeneTranscriptPositionBiotype
ENSDARG00000000568 (ell)
elongation factor RNA polymerase II 		ENSDART00000032770 (ell-001) 21167926-21244916 protein_coding
ENSDART00000100642 (ell-201) 21167801-21244942 protein_coding
ENSDARG00000001734 (fkbp8)
FK506 binding protein 8 		ENSDART00000002029 (fkbp8-001) 21246195-21270794 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004NO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105656-ENSG00000105701 CGP 9606 19:18442663-18544077
GeneTranscriptPositionBiotype
ENSG00000105656 (ELL)
elongation factor RNA polymerase II 		ENST00000262809 (ELL-001) 18442663-18522127 protein_coding
ENST00000594635 (ELL-002) 18442665-18522116 nonsense_mediated_decay
ENST00000596124 (ELL-005) 18444751-18475933 protein_coding
ENST00000596915 (ELL-007) 18472407-18522067 retained_intron
ENST00000608165 (ELL-008) 18446146-18450526 retained_intron
ENST00000610152 (ELL-009) 18444516-18445399 retained_intron
ENSG00000105701 (FKBP8)
FK506 binding protein 8, 38kDa 		ENST00000222308 (FKBP8-016) 18531762-18543524 protein_coding
ENST00000544835 (FKBP8-004) 18531752-18543573 protein_coding
ENST00000594844 (FKBP8-007) 18539419-18543245 protein_coding
ENST00000596015 (FKBP8-011) 18532105-18538371 protein_coding
ENST00000596494 (FKBP8-010) 18538076-18539448 retained_intron
ENST00000596558 (FKBP8-002) 18531762-18542972 protein_coding
ENST00000597547 (FKBP8-009) 18539432-18543483 protein_coding
ENST00000597611 (FKBP8-006) 18538216-18544077 protein_coding
ENST00000597960 (FKBP8-001) 18531751-18543577 protein_coding
ENST00000599540 (FKBP8-008) 18538376-18542498 protein_coding
ENST00000601844 (FKBP8-003) 18531814-18543577 nonsense_mediated_decay
ENST00000606531 (FKBP8-015) 18532129-18537704 protein_coding
ENST00000608443 (FKBP8-014) 18531762-18543660 protein_coding
ENST00000609656 (FKBP8-013) 18541902-18544058 protein_coding
ENSG00000269191 (AC005387.2)
 ENST00000596596 (AC005387.2-001) 18532908-18536188 antisense
ENSG00000279262 (CTD-3137H5.5)
 ENST00000623166 (CTD-3137H5.5-001) 18448275-18448802 TEC

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004NO_0001ENSDARG00000000568ENSDART00000032770ENSDART00000100642ENSDARG00000001734ENSDART00000002029CIL_0004NO_0002ENSG00000105656ENST00000262809ENST00000594635ENST00000596124ENST00000596915ENST00000608165ENST00000610152ENSG00000105701ENST00000222308ENST00000544835ENST00000594844ENST00000596015ENST00000596494ENST00000596558ENST00000597547ENST00000597611ENST00000597960ENST00000599540ENST00000601844ENST00000606531ENST00000608443ENST00000609656ENSG00000269191ENST00000596596ENSG00000279262ENST00000623166
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004NO_0001ENSDARG00000000568ENSDART00000032770ENSDART00000100642ENSDARG00000001734ENSDART00000002029CIL_0004NO_0002ENSG00000105656ENST00000262809ENST00000596124ENSG00000105701ENST00000222308ENST00000594844ENST00000596558ENST00000597547ENST00000597960ENST00000608443ENSG00000269191ENST00000596596ENSG00000279262ENST00000623166
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000000568 ENSDART00000032770 N/A N/A N/A N/A N/A N/A N/A N/A 1.306±0.00 N/A N/A N/A N/A N/A
ENSDART00000100642 N/A N/A N/A 16.388±4.20 N/A N/A 13.037±2.29 9.798±2.02 2.459±0.00 N/A 26.616±0.00 N/A N/A N/A
ENSDARG00000001734 ENSDART00000002029 N/A N/A N/A 14.502±3.58 N/A N/A 11.445±2.61 8.703±1.14 0.429±0.00 N/A 1.351±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105656 ENST00000262809 10.478±0.00 10.987±0.00 0.419±0.00 1.786±0.88 2.757±2.03 7.588±0.00 1.667±1.08 2.827±2.51 1.281±0.73 12.500±0.00 5.174±0.00 7.515±0.79 10.432±1.35 12.676±3.14
ENST00000594635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596124 N/A N/A 1.516±0.00 N/A 1.291±0.00 N/A N/A 0.393±0.00 1.134±0.00 1.459±0.00 2.279±0.00 5.266±4.27 N/A 16.429±9.36
ENST00000596915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000105701 ENST00000222308 106.255±0.00 84.093±0.00 1.876±0.00 156.265±0.00 97.432±0.00 69.659±65.86 36.407±0.00 32.760±0.00 39.488±0.00 106.313±0.00 53.187±0.00 60.880±53.83 84.082±25.56 155.817±29.57
ENST00000544835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594844 N/A N/A N/A 34.326±0.00 N/A N/A 2.977±0.00 6.045±0.00 N/A N/A N/A N/A N/A N/A
ENST00000596015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596558 N/A N/A N/A 13.712±0.00 N/A N/A 1.526±0.00 N/A 4.897±0.00 5.501±0.00 N/A N/A N/A N/A
ENST00000597547 N/A N/A 6.739±0.00 N/A 14.050±0.00 9.737±0.00 N/A 4.727±0.00 12.895±0.00 N/A 4.272±0.00 11.475±0.00 N/A 78.770±0.00
ENST00000597611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597960 N/A N/A N/A N/A N/A 1.598±0.00 N/A N/A N/A N/A N/A 40.844±0.00 N/A 81.533±0.00
ENST00000599540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608443 44.666±0.00 35.375±0.00 5.009±0.00 20.011±0.00 36.143±30.65 17.658±16.38 14.224±12.84 18.986±12.66 24.505±19.79 49.819±0.00 8.804±0.00 35.549±23.05 49.522±13.91 122.900±0.00
ENST00000609656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000269191 ENST00000596596 0.044±0.00 1.305±0.00 N/A 0.106±0.00 N/A N/A 0.175±0.00 0.143±0.00 0.207±0.00 0.368±0.16 N/A 0.946±0.50 0.114±0.02 0.566±0.44
ENSG00000279262 ENST00000623166 0.037±0.00 0.038±0.00 0.157±0.00 0.132±0.00 0.219±0.18 0.112±0.00 N/A N/A 0.199±0.00 0.176±0.00 N/A 0.705±0.58 0.250±0.14 0.543±0.30

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