C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004O1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101425-ENSG00000129988 CGP 9606 20:38260149-38377023
GeneTranscriptPositionBiotype
ENSG00000101425 (BPI)
bactericidal/permeability-increasing protein 		ENST00000262865 (BPI-002) 38304123-38337505 protein_coding
ENST00000417318 (BPI-001) 38317649-38337325 protein_coding
ENST00000418004 (BPI-006) 38260149-38304332 protein_coding
ENST00000451435 (BPI-008) 38260175-38293892 protein_coding
ENST00000479646 (BPI-007) 38260206-38288947 processed_transcript
ENST00000489039 (BPI-005) 38319786-38321808 processed_transcript
ENST00000489102 (BPI-004) 38317672-38335641 processed_transcript
ENST00000490381 (BPI-003) 38335473-38337261 processed_transcript
ENSG00000129988 (LBP)
lipopolysaccharide binding protein 		ENST00000217407 (LBP-001) 38346356-38377023 protein_coding
ENSG00000149633 (KIAA1755)
KIAA1755 		ENST00000279024 (KIAA1755-001) 38210488-38260772 protein_coding
ENST00000435901 (KIAA1755-006) 38217253-38227219 protein_coding
ENST00000460881 (KIAA1755-004) 38212472-38218183 retained_intron
ENST00000484362 (KIAA1755-003) 38212472-38223144 retained_intron
ENST00000487506 (KIAA1755-002) 38212476-38218105 retained_intron
ENST00000496900 (KIAA1755-005) 38225549-38260772 protein_coding
ENST00000611812 (KIAA1755-007) 38236806-38239599 protein_coding
ENSG00000206249 (CTD-2308N23.2)
 ENST00000437016 (CTD-2308N23.2-001) 38288331-38326536 antisense
CIL_0004O1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052922-ENSMUSG00000016024 CGP 10090 2:158258094-158332852
GeneTranscriptPositionBiotype
ENSMUSG00000016024 (Lbp)
lipopolysaccharide binding protein 		ENSMUST00000016168 (Lbp-001) 158306493-158332852 protein_coding
ENSMUST00000109491 (Lbp-002) 158306493-158310506 protein_coding
ENSMUST00000129811 (Lbp-003) 158314206-158324642 protein_coding
ENSMUST00000146600 (Lbp-004) 158306612-158318613 retained_intron
ENSMUST00000152541 (Lbp-005) 158306493-158320956 processed_transcript
ENSMUSG00000052922 (Bpi)
bactericidal permeablility increasing protein 		ENSMUST00000065039 (Bpi-002) 158258094-158284531 protein_coding
ENSMUST00000109499 (Bpi-001) 158258094-158284392 protein_coding
ENSMUST00000109500 (Bpi-003) 158258094-158284528 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004O1_0001ENSG00000101425ENST00000262865ENST00000417318ENST00000418004ENST00000451435ENST00000479646ENST00000489039ENST00000489102ENST00000490381ENSG00000129988ENST00000217407ENSG00000149633ENST00000279024ENST00000435901ENST00000460881ENST00000484362ENST00000487506ENST00000496900ENST00000611812ENSG00000206249ENST00000437016CIL_0004O1_0002ENSMUSG00000016024ENSMUST00000016168ENSMUST00000109491ENSMUST00000129811ENSMUST00000146600ENSMUST00000152541ENSMUSG00000052922ENSMUST00000065039ENSMUST00000109499ENSMUST00000109500
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004O1_0001ENSG00000101425ENST00000262865ENST00000417318ENST00000418004ENST00000479646ENST00000489102ENSG00000129988ENST00000217407ENSG00000149633ENST00000279024ENST00000435901ENST00000460881ENST00000484362ENST00000487506ENST00000496900ENSG00000206249ENST00000437016CIL_0004O1_0002ENSMUSG00000016024ENSMUST00000016168ENSMUST00000129811ENSMUST00000146600ENSMUST00000152541ENSMUSG00000052922ENSMUST00000065039ENSMUST00000109499ENSMUST00000109500
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101425 ENST00000262865 6.583±0.00 N/A 0.282±0.00 N/A 0.177±0.00 0.146±0.00 0.017±0.00 0.430±0.00 N/A 5.432±0.00 N/A 0.183±0.06 0.027±0.00 1.158±0.00
ENST00000417318 N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.00 3.360±0.00 N/A N/A 0.605±0.00 4.916±0.00
ENST00000418004 N/A N/A N/A 0.189±0.00 N/A N/A N/A 0.233±0.00 1.310±0.00 N/A N/A 0.960±0.00 N/A N/A
ENST00000451435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479646 N/A 0.345±0.00 N/A 0.210±0.00 N/A 0.271±0.00 N/A N/A 0.212±0.00 N/A N/A 2.842±0.29 N/A N/A
ENST00000489039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489102 N/A 0.160±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.00 N/A N/A 2.568±0.00
ENST00000490381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000129988 ENST00000217407 2.330±0.00 10.809±0.00 0.408±0.00 0.103±0.00 1.377±0.85 3.312±0.00 0.342±0.00 23.578±10.01 983.709±0.00 0.065±0.00 0.873±0.80 0.211±0.14 0.226±0.10 0.477±0.34
ENSG00000149633 ENST00000279024 0.065±0.00 0.160±0.00 N/A 0.938±0.00 N/A 0.288±0.00 0.086±0.00 N/A N/A N/A 0.005±0.00 0.725±0.44 0.038±0.01 N/A
ENST00000435901 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.211±0.00 N/A 0.584±0.00 N/A 0.804±0.00
ENST00000460881 N/A 0.429±0.00 N/A 1.697±0.00 N/A 0.566±0.00 0.158±0.00 1.089±0.00 N/A N/A N/A 0.969±0.00 N/A 0.262±0.00
ENST00000484362 N/A 0.551±0.00 N/A 1.728±1.48 0.239±0.00 N/A N/A 0.674±0.00 0.383±0.00 N/A N/A 1.295±0.85 N/A 0.248±0.00
ENST00000487506 0.192±0.00 0.799±0.00 N/A N/A N/A 0.601±0.41 N/A 0.455±0.00 0.109±0.00 0.433±0.28 0.035±0.00 0.965±0.67 0.132±0.06 0.602±0.28
ENST00000496900 0.161±0.00 1.007±0.00 N/A 2.245±0.00 0.498±0.00 0.543±0.13 0.100±0.00 1.153±0.00 0.219±0.00 0.448±0.13 0.110±0.00 1.101±0.63 0.055±0.02 1.512±0.00
ENST00000611812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206249 ENST00000437016 N/A 0.629±0.00 N/A 0.270±0.00 0.207±0.00 0.098±0.00 0.145±0.00 0.187±0.00 0.160±0.00 N/A 0.175±0.00 0.040±0.00 0.033±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016024 ENSMUST00000016168 65.552±24.57 5.829±0.55 17.572±3.23 0.434±0.12 11.088±2.04 2.368±0.93 2.428±0.44 2.994±0.44 29.621±15.14 22.122±5.75 1.987±0.31 40.602±17.56 7.295±3.07 1.630±0.78
ENSMUST00000109491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129811 N/A N/A N/A N/A 51.630±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.891±0.00
ENSMUST00000146600 N/A N/A N/A 0.033±0.00 N/A 1.075±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152541 N/A 4.379±0.00 N/A N/A N/A 1.227±0.16 N/A N/A N/A 8.854±0.00 N/A N/A N/A N/A
ENSMUSG00000052922 ENSMUST00000065039 N/A N/A N/A N/A N/A N/A 0.007±0.00 0.042±0.02 N/A N/A N/A N/A N/A 6.667±0.64
ENSMUST00000109499 0.066±0.03 N/A 0.004±0.00 N/A 0.026±0.00 N/A 0.016±0.00 0.021±0.01 0.010±0.00 N/A N/A 0.097±0.06 0.018±0.01 12.289±4.37
ENSMUST00000109500 N/A N/A N/A N/A N/A N/A 0.008±0.00 0.026±0.00 0.012±0.00 N/A N/A 0.141±0.02 0.011±0.00 11.215±0.85

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