C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bactericidal/permeability-increasing protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262865 BPI-002 ENSG00000101425 9606 + 20:38304123-38337505 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000262865
Transcript ID Adipose Bladder Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000262865 6.583±0.00 0.282±0.00 0.177±0.00 0.146±0.00 0.017±0.00 0.430±0.00 5.432±0.00 0.183±0.06 0.027±0.00 1.158±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NZ CIL_0004NZ_0001 CGP 20:38127387-38260772
CIL_0004O0 CIL_0004O0_0001 CGP 20:38210488-38337505
CIL_00081Y CIL_00081Y_0001 VISTA 20:38219747-38821106
CIL_0004O1 CIL_0004O1_0001 CGP 20:38260149-38377023

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001530 IDA lipopolysaccharide binding
GO:0005737 IEA cytoplasm
GO:0005887 TAS integral component of plasma membrane
GO:0006955 IEA immune response
GO:0008289 IEA lipid binding
GO:0032715 IDA negative regulation of interleukin-6 production
GO:0032717 IDA negative regulation of interleukin-8 production
GO:0032720 IDA negative regulation of tumor necrosis factor production
GO:0042742 IEA defense response to bacterium
GO:0043031 IDA negative regulation of macrophage activation
GO:0070062 IDA extracellular vesicular exosome

Homologs

No Homologs available.

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