C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004OV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000181634-ENSG00000106952 CGP 9606 9:114784635-114930595
GeneTranscriptPositionBiotype
ENSG00000106952 (TNFSF8)
tumor necrosis factor (ligand) superfamily, member 8 		ENST00000223795 (TNFSF8-001) 114902844-114930417 protein_coding
ENST00000474301 (TNFSF8-002) 114893723-114904308 processed_transcript
ENST00000618336 (TNFSF8-201) 114893343-114930595 protein_coding
ENSG00000181634 (TNFSF15)
tumor necrosis factor (ligand) superfamily, member 15 		ENST00000374044 (TNFSF15-002) 114789320-114792108 protein_coding
ENST00000374045 (TNFSF15-001) 114784635-114806126 protein_coding
ENSG00000221734 (AL390240.1)
 ENST00000408807 (AL390240.1-201) 114792194-114792266 miRNA
ENSG00000229817 (RP11-78H18.2)
 ENST00000380194 (RP11-78H18.2-001) 114845594-114848585 processed_pseudogene
CIL_0004OV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050395-ENSMUSG00000028362 CGP 10090 4:63727084-63861347
GeneTranscriptPositionBiotype
ENSMUSG00000028362 (Tnfsf8)
tumor necrosis factor (ligand) superfamily, member 8 		ENSMUST00000030047 (Tnfsf8-001) 63831308-63861347 protein_coding
ENSMUSG00000050395 (Tnfsf15)
tumor necrosis factor (ligand) superfamily, member 15 		ENSMUST00000062246 (Tnfsf15-001) 63727084-63745113 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004OV_0001ENSG00000106952ENST00000223795ENST00000474301ENST00000618336ENSG00000181634ENST00000374044ENST00000374045ENSG00000221734ENST00000408807ENSG00000229817ENST00000380194CIL_0004OV_0002ENSMUSG00000028362ENSMUST00000030047ENSMUSG00000050395ENSMUST00000062246
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004OV_0001ENSG00000106952ENST00000223795ENST00000474301ENST00000618336ENSG00000181634ENST00000374044ENST00000374045ENSG00000221734ENST00000408807ENSG00000229817ENST00000380194CIL_0004OV_0002ENSMUSG00000028362ENSMUST00000030047ENSMUSG00000050395ENSMUST00000062246
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106952 ENST00000223795 0.519±0.00 2.046±0.00 0.075±0.00 0.165±0.02 0.824±0.50 0.305±0.19 0.268±0.02 0.172±0.13 0.409±0.27 N/A 0.043±0.00 0.439±0.17 1.312±0.14 0.092±0.04
ENST00000474301 N/A 4.466±0.00 N/A N/A N/A N/A N/A N/A 0.101±0.00 N/A N/A N/A N/A N/A
ENST00000618336 0.273±0.00 2.525±0.00 N/A 0.085±0.05 0.292±0.15 N/A 0.045±0.00 0.209±0.10 N/A 0.803±0.00 N/A 0.068±0.03 N/A N/A
ENSG00000181634 ENST00000374044 N/A N/A N/A N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A N/A N/A N/A
ENST00000374045 0.041±0.00 0.244±0.00 0.355±0.00 0.037±0.01 0.523±0.20 0.344±0.06 0.047±0.01 0.596±0.59 0.230±0.22 0.694±0.14 0.026±0.00 0.427±0.29 0.880±0.05 0.062±0.00
ENSG00000221734 ENST00000408807 1.399±0.00 0.689±0.00 N/A 0.330±0.00 0.962±0.00 N/A 0.342±0.00 0.322±0.00 0.319±0.00 N/A N/A 45.188±0.00 N/A 0.613±0.00
ENSG00000229817 ENST00000380194 0.067±0.00 0.016±0.00 N/A 0.019±0.00 N/A 0.086±0.00 0.019±0.01 0.050±0.00 N/A N/A 0.029±0.00 0.004±0.00 N/A 0.013±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028362 ENSMUST00000030047 0.064±0.05 0.100±0.08 0.119±0.01 0.016±0.01 1.039±0.40 0.045±0.02 0.026±0.01 0.065±0.03 0.020±0.01 0.148±0.06 0.015±0.01 0.096±0.06 0.035±0.03 0.014±0.01
ENSMUSG00000050395 ENSMUST00000062246 0.086±0.01 0.094±0.07 N/A 0.010±0.00 0.129±0.01 0.410±0.08 0.014±0.01 0.494±0.27 0.018±0.01 0.576±0.10 0.008±0.00 0.209±0.16 0.036±0.02 0.218±0.11

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