C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004PJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000040338-ENSDARG00000078447 CGP 7955 10:7425124-7450380
GeneTranscriptPositionBiotype
ENSDARG00000040338 (hvcn1)
hydrogen voltage-gated channel 1 		ENSDART00000059028 (hvcn1-201) 7425124-7436014 protein_coding
ENSDARG00000078447 (tctn1)
tectonic family member 1 		ENSDART00000108643 (tctn1-201) 7439320-7450380 protein_coding
CIL_0004PJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000064267-ENSMUSG00000038593 CGP 10090 5:122206804-122264460
GeneTranscriptPositionBiotype
ENSMUSG00000038593 (Tctn1)
tectonic family member 1 		ENSMUST00000111738 (Tctn1-001) 122241287-122264460 protein_coding
ENSMUST00000137118 (Tctn1-003) 122248440-122254566 retained_intron
ENSMUST00000141281 (Tctn1-002) 122241287-122264460 nonsense_mediated_decay
ENSMUST00000176677 (Tctn1-006) 122245571-122251678 processed_transcript
ENSMUST00000177148 (Tctn1-005) 122252324-122264415 retained_intron
ENSMUSG00000064267 (Hvcn1)
hydrogen voltage-gated channel 1 		ENSMUST00000072602 (Hvcn1-001) 122209729-122242297 protein_coding
ENSMUST00000100747 (Hvcn1-002) 122210134-122242297 protein_coding
ENSMUST00000143560 (Hvcn1-004) 122209909-122238510 protein_coding
ENSMUST00000145854 (Hvcn1-003) 122206804-122233540 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PJ_0001ENSDARG00000040338ENSDART00000059028ENSDARG00000078447ENSDART00000108643CIL_0004PJ_0002ENSMUSG00000038593ENSMUST00000111738ENSMUST00000137118ENSMUST00000141281ENSMUST00000176677ENSMUST00000177148ENSMUSG00000064267ENSMUST00000072602ENSMUST00000100747ENSMUST00000143560ENSMUST00000145854
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PJ_0001ENSDARG00000040338ENSDART00000059028ENSDARG00000078447ENSDART00000108643CIL_0004PJ_0002ENSMUSG00000038593ENSMUST00000111738ENSMUST00000137118ENSMUST00000141281ENSMUSG00000064267ENSMUST00000072602ENSMUST00000100747ENSMUST00000145854
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040338 ENSDART00000059028 N/A N/A N/A 2.039±1.06 N/A N/A 7.999±4.98 10.862±4.25 5.006±0.00 N/A 1.994±0.00 N/A N/A N/A
ENSDARG00000078447 ENSDART00000108643 N/A N/A N/A 0.742±0.09 N/A N/A 1.002±0.00 1.766±0.00 0.051±0.00 N/A 0.430±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038593 ENSMUST00000111738 9.073±1.86 13.672±1.77 5.364±0.53 5.001±1.15 8.296±2.45 5.319±1.45 1.455±0.26 4.605±0.95 1.293±0.50 8.247±1.80 0.601±0.18 9.172±2.37 3.756±1.55 9.204±3.04
ENSMUST00000137118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.815±0.00 13.893±2.13 N/A N/A
ENSMUST00000141281 6.301±0.00 N/A 1.963±0.00 3.841±0.08 7.399±2.85 3.405±0.46 0.694±0.00 3.071±0.75 0.769±0.18 4.651±0.50 0.266±0.00 7.561±2.82 2.390±0.45 15.859±0.75
ENSMUST00000176677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000064267 ENSMUST00000072602 10.438±2.07 N/A 3.246±0.24 2.681±0.35 24.265±5.13 3.569±0.36 0.984±0.20 3.753±0.92 1.283±1.13 7.924±0.19 2.234±2.08 4.669±0.70 4.895±0.53 N/A
ENSMUST00000100747 N/A N/A N/A N/A 6.132±2.03 N/A N/A N/A 0.594±0.00 N/A N/A N/A N/A N/A
ENSMUST00000143560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.863±4.87 N/A

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