C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | tectonic family member 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000177148  |
Tctn1-005 |
ENSMUSG00000038593 |
10090 | - |
5:122252324-122264415  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000903 | CIL_000903_0002 | VISTA | 5:121732502-122333355 |
| CIL_0008YU | CIL_0008YU_0002 | VISTA | 5:121792218-122394768 |
| CIL_0004PJ | CIL_0004PJ_0002 | CGP | 5:122206804-122264460 |
| CIL_0004PK | CIL_0004PK_0002 | CGP | 5:122241287-122324281 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000304501
|
SOX7-001 | protein_coding | Homo_sapiens | 0.0002 | 53 |
|
ENST00000377495
|
TMEM236-001 | protein_coding | Homo_sapiens | 0.0000006 | 62 |
|
ENST00000393640
|
ST3GAL2-001 | protein_coding | Homo_sapiens | 0.00005 | 57 |
|
ENST00000469688
|
RPL35AP32-001 | processed_pseudogene | Homo_sapiens | 3e-28 | 128 |
