C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cilia and flagella associated protein 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262498 CFAP20-001 ENSG00000070761 9606 - 16:58113588-58129450 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262498
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262498 5.676±0.00 9.794±0.00 1.931±0.00 14.652±1.19 4.153±1.86 4.931±2.95 7.391±4.05 7.998±2.82 5.980±2.39 7.119±4.94 2.427±0.51 15.885±6.71 24.129±8.13 20.033±3.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Z0 CIL_0008Z0_0001 VISTA 16:57818949-58421282
CIL_0004RX CIL_0004RX_0001 CGP 16:58025566-58129450
CIL_0004RW CIL_0004RW_0001 CGP 16:58113588-58197920

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005814 IDA centriole
GO:0005874 IEA microtubule
GO:0005929 IDA cilium
GO:0007275 TAS multicellular organismal development
GO:0018095 IMP protein polyglutamylation
GO:0036064 IDA ciliary basal body
GO:0044822 IDA poly(A) RNA binding
GO:0060271 IMP cilium morphogenesis
GO:0060296 IDA regulation of cilium beat frequency involved in ciliary motility
GO:0070062 IDA extracellular vesicular exosome
GO:2000147 IDA positive regulation of cell motility
GO:2000253 IDA positive regulation of feeding behavior

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034249 Gtl3-201 protein_coding Mus_musculus 0 950

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