C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004S8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000057414-ENSDARG00000062302 CGP 7955 3:15341405-15399995
GeneTranscriptPositionBiotype
ENSDARG00000057414 (phb)
prohibitin 		ENSDART00000080075 (phb-001) 15341405-15351593 protein_coding
ENSDARG00000062302 (znf652)
zinc finger protein 652 		ENSDART00000089923 (znf652-201) 15380543-15399995 protein_coding
ENSDART00000146651 (znf652-001) 15381045-15399709 protein_coding
ENSDARG00000094116 (si:dkey-91d10.9)
si:dkey-91d10.9 		ENSDART00000140160 (si:dkey-91d10.9-001) 15360317-15378777 processed_transcript

Danio rerio Ensembl (Zv9)

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CIL_0004S8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038845-ENSMUSG00000075595 CGP 10090 11:95666957-95835115
GeneTranscriptPositionBiotype
ENSMUSG00000018381 (Abi3)
ABI gene family, member 3 		ENSMUST00000059026 (Abi3-001) 95830074-95842409 protein_coding
ENSMUST00000131049 (Abi3-002) 95831943-95842476 processed_transcript
ENSMUST00000137645 (Abi3-003) 95832723-95835890 protein_coding
ENSMUST00000143492 (Abi3-004) 95837077-95842098 processed_transcript
ENSMUSG00000038845 (Phb)
prohibitin 		ENSMUST00000036374 (Phb-002) 95667064-95679708 protein_coding
ENSMUST00000123001 (Phb-005) 95671450-95676060 processed_transcript
ENSMUST00000123071 (Phb-004) 95667000-95671642 processed_transcript
ENSMUST00000125172 (Phb-001) 95666957-95680773 protein_coding
ENSMUST00000127031 (Phb-003) 95667010-95668613 processed_transcript
ENSMUSG00000045075 (Gm9796)
predicted gene 9796 		ENSMUST00000062249 (Gm9796-201) 95696894-95699143 lincRNA
ENSMUST00000191115 (Gm9796-001) 95696898-95699143 lincRNA
ENSMUSG00000075595 (Zfp652)
zinc finger protein 652 		ENSMUST00000091565 (Zfp652-201) 95749067-95764711 protein_coding
ENSMUST00000107717 (Zfp652-001) 95712673-95772353 protein_coding
ENSMUST00000133070 (Zfp652-003) 95713011-95835115 nonsense_mediated_decay
ENSMUST00000148945 (Zfp652-002) 95749000-95772353 nonsense_mediated_decay
ENSMUSG00000075596 (B130006D01Rik)
RIKEN cDNA B130006D01 gene 		ENSMUST00000100534 (B130006D01Rik-201) 95723587-95726710 protein_coding
ENSMUSG00000082981 (Polr2k-ps)
polymerase (RNA) II (DNA directed) polypeptide K, pseudogene 		ENSMUST00000120170 (Polr2k-ps-001) 95761491-95761665 processed_pseudogene
ENSMUSG00000097176 (Gm26830)
predicted gene, 26830 		ENSMUST00000180389 (Gm26830-201) 95669952-95672719 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004S8_0001ENSDARG00000057414ENSDART00000080075ENSDARG00000062302ENSDART00000089923ENSDART00000146651ENSDARG00000094116ENSDART00000140160CIL_0004S8_0002ENSMUSG00000018381ENSMUST00000059026ENSMUST00000131049ENSMUST00000137645ENSMUST00000143492ENSMUSG00000038845ENSMUST00000036374ENSMUST00000123001ENSMUST00000123071ENSMUST00000125172ENSMUST00000127031ENSMUSG00000045075ENSMUST00000062249ENSMUST00000191115ENSMUSG00000075595ENSMUST00000091565ENSMUST00000107717ENSMUST00000133070ENSMUST00000148945ENSMUSG00000075596ENSMUST00000100534ENSMUSG00000082981ENSMUST00000120170ENSMUSG00000097176ENSMUST00000180389
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004S8_0001ENSDARG00000057414ENSDART00000080075ENSDARG00000062302ENSDART00000089923ENSDARG00000094116ENSDART00000140160CIL_0004S8_0002ENSMUSG00000018381ENSMUST00000059026ENSMUST00000137645ENSMUSG00000038845ENSMUST00000036374ENSMUST00000123071ENSMUST00000125172ENSMUSG00000045075ENSMUST00000062249ENSMUST00000191115ENSMUSG00000075595ENSMUST00000091565ENSMUST00000107717ENSMUST00000148945ENSMUSG00000075596ENSMUST00000100534ENSMUSG00000082981ENSMUST00000120170ENSMUSG00000097176ENSMUST00000180389
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000057414 ENSDART00000080075 N/A N/A N/A 39.736±7.12 N/A N/A 86.070±30.92 51.295±23.89 12.093±0.00 N/A 37.551±0.00 N/A N/A N/A
ENSDARG00000062302 ENSDART00000089923 N/A N/A N/A 1.470±0.00 N/A N/A 0.405±0.00 N/A 0.045±0.00 N/A N/A N/A N/A N/A
ENSDART00000146651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000094116 ENSDART00000140160 N/A N/A N/A 4.361±0.00 N/A N/A 1.747±0.00 N/A 0.375±0.00 N/A 0.581±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018381 ENSMUST00000059026 17.393±7.60 28.190±9.76 7.788±0.19 N/A 24.999±11.78 13.418±4.61 24.459±5.58 6.588±2.27 6.861±3.68 33.664±1.00 N/A 6.325±1.48 3.807±1.42 24.877±13.42
ENSMUST00000131049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137645 N/A N/A N/A N/A 24.226±2.04 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038845 ENSMUST00000036374 33.596±7.25 36.776±3.61 18.100±0.00 34.412±0.00 24.610±8.30 18.541±2.68 48.943±13.20 46.050±9.90 54.442±3.78 10.527±2.16 39.879±2.91 38.713±12.44 31.770±20.04 N/A
ENSMUST00000123001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123071 N/A N/A 37.798±4.24 28.887±0.00 N/A N/A N/A N/A 111.450±8.66 N/A N/A 62.891±33.23 66.000±35.64 21.237±0.00
ENSMUST00000125172 26.747±3.99 19.504±1.00 29.459±1.03 32.868±4.60 16.919±4.17 17.776±2.37 41.047±3.41 49.108±4.38 29.538±14.36 13.577±1.61 35.659±0.96 24.154±7.47 34.778±17.20 22.109±11.11
ENSMUST00000127031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000045075 ENSMUST00000062249 0.054±0.01 0.113±0.04 0.139±0.00 0.188±0.10 0.085±0.01 0.029±0.02 0.057±0.02 0.057±0.02 0.030±0.02 0.091±0.01 0.081±0.04 0.055±0.04 0.017±0.01 0.052±0.03
ENSMUST00000191115 0.111±0.06 0.113±0.04 0.132±0.00 0.157±0.14 0.085±0.01 0.029±0.02 0.057±0.02 0.058±0.02 0.068±0.05 0.118±0.05 0.312±0.12 0.092±0.06 0.033±0.02 0.053±0.02
ENSMUSG00000075595 ENSMUST00000091565 N/A N/A N/A N/A 12.979±1.72 7.952±1.95 N/A N/A N/A N/A N/A 11.893±4.46 5.176±1.57 N/A
ENSMUST00000107717 5.444±1.89 N/A 6.548±1.13 4.712±1.72 3.895±2.20 3.125±0.75 4.086±0.96 3.589±0.00 2.331±0.63 15.620±0.00 13.706±0.74 5.807±2.37 1.966±0.58 0.640±0.00
ENSMUST00000133070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148945 4.564±0.00 N/A 4.970±0.50 4.759±0.37 N/A 6.443±0.53 N/A N/A 2.549±0.33 N/A N/A 5.955±1.11 1.854±0.04 N/A
ENSMUSG00000075596 ENSMUST00000100534 0.113±0.07 0.133±0.06 0.076±0.01 0.124±0.06 0.073±0.03 0.041±0.00 0.035±0.01 0.049±0.02 0.076±0.04 0.146±0.07 0.009±0.00 0.110±0.12 0.059±0.07 0.053±0.03
ENSMUSG00000082981 ENSMUST00000120170 N/A N/A 7.387±0.00 1.706±0.67 N/A N/A N/A N/A 1.971±0.00 21.561±0.00 N/A 3.645±0.00 0.310±0.00 N/A
ENSMUSG00000097176 ENSMUST00000180389 0.069±0.00 N/A 0.071±0.03 0.408±0.48 N/A N/A 0.090±0.06 0.052±0.00 0.054±0.04 N/A 0.049±0.02 0.399±0.26 0.203±0.26 0.152±0.11

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