C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prohibitin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036374 Phb-002 ENSMUSG00000038845 10090 + 11:95667064-95679708 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000036374
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000036374 33.596±7.25 36.776±3.61 18.100±0.00 34.412±0.00 24.610±8.30 18.541±2.68 48.943±13.20 46.050±9.90 54.442±3.78 10.527±2.16 39.879±2.91 38.713±12.44 31.770±20.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004S8 CIL_0004S8_0002 CGP 11:95666957-95835115

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000981 IDA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0071897 IMP DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300408 PHB-001 protein_coding Homo_sapiens 0 859
ENST00000392260 PHBP1-001 processed_pseudogene Homo_sapiens 0 604
ENST00000393345 PHB-004 retained_intron Homo_sapiens 0 689
ENST00000412562 PHBP3-001 processed_pseudogene Homo_sapiens 0 691
ENST00000415677 PHBP7-001 processed_pseudogene Homo_sapiens 0 669
ENST00000416467 PHBP10-001 processed_pseudogene Homo_sapiens 0 712
ENST00000419140 PHB-002 protein_coding Homo_sapiens 0 859
ENST00000420550 PHBP11-001 processed_pseudogene Homo_sapiens 0 717
ENST00000434917 PHB-007 protein_coding Homo_sapiens 0 516
ENST00000437447 PHBP4-001 processed_pseudogene Homo_sapiens 0 479
ENST00000446735 PHB-003 protein_coding Homo_sapiens 0 833
ENST00000453578 PHBP9-001 processed_pseudogene Homo_sapiens 0 603
ENST00000504124 PHB-009 protein_coding Homo_sapiens 0 859
ENST00000506273 PHB-015 processed_transcript Homo_sapiens 0 514
ENST00000507748 PHB-014 retained_intron Homo_sapiens 0 270
ENST00000508009 PHB-013 processed_transcript Homo_sapiens 0 481
ENST00000511832 PHB-201 protein_coding Homo_sapiens 0 573
ENST00000511933 PHB-016 retained_intron Homo_sapiens 4.00001e-41 172
ENST00000512041 PHB-010 protein_coding Homo_sapiens 0 837
ENST00000513412 PHB-011 retained_intron Homo_sapiens 1e-30 137
ENST00000532859 RP11-472I20.2-001 processed_pseudogene Homo_sapiens 0 656
ENST00000546648 RP11-474C8.4-001 processed_pseudogene Homo_sapiens 0 678
ENST00000547512 RP11-416A17.6-001 processed_pseudogene Homo_sapiens 0 586
ENST00000562636 RP11-467J12.1-001 processed_pseudogene Homo_sapiens 0 684
ENST00000603694 RP11-1007O24.4-001 processed_pseudogene Homo_sapiens 0 516
ENST00000614445 PHB-202 protein_coding Homo_sapiens 0 859
ENST00000617874 PHB-203 protein_coding Homo_sapiens 0 859

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