C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004UX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159307-ENSG00000186732 CGP 9606 22:43197283-43507848
GeneTranscriptPositionBiotype
ENSG00000203527 (Z99756.1)
 ENST00000458463 (Z99756.1-001) 43275955-43283830 antisense
ENSG00000236117 (RP4-754E20__A.5)
 ENST00000450750 (RP4-754E20__A.5-001) 43400331-43409681 lincRNA
ENSG00000236272 (Z82214.3)
 ENST00000420269 (Z82214.3-001) 43212674-43213661 antisense
CIL_0004UX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000016763-ENSMUSG00000041708 CGP 10090 15:83602583-83858494
GeneTranscriptPositionBiotype
ENSMUSG00000016763 (Scube1)
signal peptide, CUB domain, EGF-like 1 		ENSMUST00000016907 (Scube1-002) 83606506-83725021 protein_coding
ENSMUST00000043634 (Scube1-003) 83605003-83725021 protein_coding
ENSMUST00000076060 (Scube1-001) 83606506-83725021 protein_coding
ENSMUST00000144773 (Scube1-004) 83604999-83725021 retained_intron
ENSMUST00000171496 (Scube1-201) 83602583-83725021 protein_coding
ENSMUSG00000041708 (Mpped1)
metallophosphoesterase domain containing 1 		ENSMUST00000046168 (Mpped1-003) 83780023-83858484 protein_coding
ENSMUST00000109469 (Mpped1-004) 83779467-83792131 protein_coding
ENSMUST00000109470 (Mpped1-001) 83784829-83858484 protein_coding
ENSMUST00000123387 (Mpped1-002) 83788880-83858494 nonsense_mediated_decay
ENSMUST00000125739 (Mpped1-006) 83836007-83856315 protein_coding
ENSMUST00000148868 (Mpped1-007) 83836040-83854523 protein_coding
ENSMUST00000150489 (Mpped1-005) 83796582-83852077 protein_coding
ENSMUST00000163723 (Mpped1-008) 83779982-83856729 protein_coding
ENSMUST00000171560 (Mpped1-010) 83800030-83856295 nonsense_mediated_decay
ENSMUST00000172115 (Mpped1-009) 83791939-83856314 protein_coding
ENSMUST00000172398 (Mpped1-011) 83792014-83856410 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UX_0001ENSG00000203527ENST00000458463ENSG00000236117ENST00000450750ENSG00000236272ENST00000420269CIL_0004UX_0002ENSMUSG00000016763ENSMUST00000016907ENSMUST00000043634ENSMUST00000076060ENSMUST00000144773ENSMUST00000171496ENSMUSG00000041708ENSMUST00000046168ENSMUST00000109469ENSMUST00000109470ENSMUST00000123387ENSMUST00000125739ENSMUST00000148868ENSMUST00000150489ENSMUST00000163723ENSMUST00000171560ENSMUST00000172115ENSMUST00000172398
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UX_0001ENSG00000203527ENST00000458463ENSG00000236117ENST00000450750ENSG00000236272ENST00000420269CIL_0004UX_0002ENSMUSG00000016763ENSMUST00000016907ENSMUST00000043634ENSMUST00000076060ENSMUST00000144773ENSMUST00000171496ENSMUSG00000041708ENSMUST00000046168ENSMUST00000109470ENSMUST00000123387ENSMUST00000125739ENSMUST00000148868ENSMUST00000163723ENSMUST00000172398
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000203527 ENST00000458463 0.071±0.00 0.174±0.00 N/A 0.211±0.00 0.143±0.00 0.051±0.03 0.128±0.00 0.093±0.00 0.103±0.00 0.212±0.00 0.016±0.00 0.037±0.02 0.040±0.01 0.252±0.04
ENSG00000236117 ENST00000450750 N/A N/A N/A 0.024±0.00 N/A N/A N/A 0.300±0.00 0.368±0.00 N/A N/A N/A N/A 0.463±0.29
ENSG00000236272 ENST00000420269 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.239±0.00 N/A 0.107±0.00 N/A 1.786±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016763 ENSMUST00000016907 6.968±6.98 1.737±1.01 1.807±0.58 N/A 0.706±0.31 1.278±0.33 0.300±0.09 0.361±0.15 0.034±0.00 1.782±0.47 0.069±0.03 4.182±1.15 0.820±0.82 0.220±0.10
ENSMUST00000043634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A
ENSMUST00000076060 5.229±5.19 2.181±0.55 N/A N/A 0.778±0.36 2.615±0.51 0.179±0.06 0.547±0.10 0.031±0.02 3.005±0.98 0.039±0.02 3.565±1.27 0.511±0.29 0.059±0.00
ENSMUST00000144773 N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A 0.474±0.00 N/A N/A
ENSMUST00000171496 7.193±7.16 1.396±0.26 2.119±0.41 2.701±0.48 0.231±0.00 1.498±0.36 0.093±0.01 0.385±0.09 0.048±0.03 1.453±0.17 0.038±0.01 1.801±0.63 0.112±0.03 0.061±0.03
ENSMUSG00000041708 ENSMUST00000046168 N/A N/A N/A 22.618±13.91 N/A N/A N/A N/A 0.245±0.00 N/A N/A N/A N/A 1.197±0.62
ENSMUST00000109469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.181±0.07 N/A 1.571±0.00
ENSMUST00000123387 0.020±0.01 N/A 0.012±0.00 N/A N/A 0.014±0.00 0.008±0.00 N/A 0.010±0.01 N/A N/A 0.201±0.12 0.007±0.00 N/A
ENSMUST00000125739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.696±0.09 N/A N/A
ENSMUST00000148868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.334±0.10 N/A N/A
ENSMUST00000150489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163723 N/A 0.078±0.00 N/A N/A 0.058±0.00 N/A N/A N/A 0.056±0.02 N/A N/A 0.335±0.14 0.037±0.02 N/A
ENSMUST00000171560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172398 N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 0.045±0.00 N/A N/A N/A 0.042±0.00 0.651±0.00

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