C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004X0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000021372-ENSDARG00000078142 CGP 7955 12:1044228-1146977
GeneTranscriptPositionBiotype
ENSDARG00000021372 (tob1b)
transducer of ERBB2, 1b 		ENSDART00000022688 (tob1b-001) 1044228-1047498 protein_coding
ENSDARG00000078142 (CABZ01073118.1)
Uncharacterized protein 		ENSDART00000088351 (CABZ01073118.1-201) 1114949-1146977 protein_coding

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CIL_0004X0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032619-ENSDARG00000074531 CGP 7955 3:17914556-18102544
GeneTranscriptPositionBiotype
ENSDARG00000032619 (tob1a)
transducer of ERBB2, 1a 		ENSDART00000049240 (tob1a-001) 17914556-17918223 protein_coding
ENSDARG00000094871 (si:ch211-261n9.3)
si:ch211-261n9.3 		ENSDART00000144374 (si:ch211-261n9.3-001) 17918625-17923051 processed_transcript

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CIL_0004X0_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141232-ENSG00000008294 CGP 9606 17:50862223-51120865
GeneTranscriptPositionBiotype
ENSG00000008294 (SPAG9)
sperm associated antigen 9 		ENST00000262013 (SPAG9-001) 50962174-51120865 protein_coding
ENST00000357122 (SPAG9-002) 50965644-51120865 protein_coding
ENST00000502329 (SPAG9-023) 51031443-51047471 retained_intron
ENST00000505173 (SPAG9-005) 50989639-51056424 retained_intron
ENST00000505279 (SPAG9-003) 50965627-51120734 protein_coding
ENST00000506483 (SPAG9-016) 50993773-50995960 retained_intron
ENST00000506500 (SPAG9-021) 50966300-50975360 retained_intron
ENST00000509724 (SPAG9-022) 50964149-50965494 processed_transcript
ENST00000510283 (SPAG9-007) 50965075-51046878 protein_coding
ENST00000510855 (SPAG9-011) 51021252-51046878 protein_coding
ENST00000511312 (SPAG9-020) 50976600-50982672 retained_intron
ENST00000511795 (SPAG9-012) 51001837-51020259 protein_coding
ENST00000511987 (SPAG9-010) 51030914-51046837 retained_intron
ENST00000513547 (SPAG9-013) 51001835-51016256 processed_transcript
ENST00000513746 (SPAG9-019) 50974870-50990585 nonsense_mediated_decay
ENST00000513827 (SPAG9-014) 50996229-51001745 retained_intron
ENST00000513906 (SPAG9-017) 50985699-50993937 protein_coding
ENST00000514205 (SPAG9-018) 50990023-50990742 retained_intron
ENST00000514613 (SPAG9-004) 50989540-51079622 retained_intron
ENST00000515685 (SPAG9-015) 50998413-51001744 retained_intron
ENST00000576492 (SPAG9-024) 51007269-51040451 processed_transcript
ENST00000618113 (SPAG9-201) 50962174-51120865 protein_coding
ENSG00000141232 (TOB1)
transducer of ERBB2, 1 		ENST00000268957 (TOB1-002) 50862980-50867978 protein_coding
ENST00000499247 (TOB1-001) 50862223-50866345 protein_coding
ENST00000509385 (TOB1-003) 50863369-50866354 processed_transcript
ENSG00000247011 (RP11-700H6.1)
 ENST00000501718 (RP11-700H6.1-001) 50934989-50944713 lincRNA
ENSG00000249870 (RP11-481C4.1)
 ENST00000509833 (RP11-481C4.1-001) 51042524-51085471 antisense
ENSG00000251665 (RP11-700H6.2)
 ENST00000506394 (RP11-700H6.2-002) 50944104-50947827 lincRNA
ENST00000512717 (RP11-700H6.2-001) 50944114-50948750 lincRNA

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004X0_0001ENSDARG00000021372ENSDART00000022688ENSDARG00000078142ENSDART00000088351CIL_0004X0_0002ENSDARG00000032619ENSDART00000049240ENSDARG00000094871ENSDART00000144374CIL_0004X0_0003ENSG00000008294ENST00000262013ENST00000357122ENST00000502329ENST00000505173ENST00000505279ENST00000506483ENST00000506500ENST00000509724ENST00000510283ENST00000510855ENST00000511312ENST00000511795ENST00000511987ENST00000513547ENST00000513746ENST00000513827ENST00000513906ENST00000514205ENST00000514613ENST00000515685ENST00000576492ENST00000618113ENSG00000141232ENST00000268957ENST00000499247ENST00000509385ENSG00000247011ENST00000501718ENSG00000249870ENST00000509833ENSG00000251665ENST00000506394ENST00000512717
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004X0_0001ENSDARG00000021372ENSDART00000022688ENSDARG00000078142ENSDART00000088351CIL_0004X0_0002ENSDARG00000032619ENSDART00000049240ENSDARG00000094871ENSDART00000144374CIL_0004X0_0003ENSG00000008294ENST00000262013ENST00000357122ENST00000505173ENST00000505279ENST00000510283ENST00000514613ENST00000618113ENSG00000141232ENST00000268957ENST00000499247ENST00000509385ENSG00000247011ENST00000501718ENSG00000249870ENST00000509833ENSG00000251665ENST00000506394ENST00000512717
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021372 ENSDART00000022688 N/A N/A N/A 54.365±28.94 N/A N/A 84.648±36.69 63.857±28.01 54.192±0.00 N/A 199.018±0.00 N/A N/A N/A
ENSDARG00000078142 ENSDART00000088351 N/A N/A N/A 4.564±4.44 N/A N/A 3.937±0.10 1.133±0.58 0.962±0.00 N/A 2.708±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000032619 ENSDART00000049240 N/A N/A N/A 55.088±19.56 N/A N/A 122.262±56.54 45.272±21.14 20.157±0.00 N/A 252.065±0.00 N/A N/A N/A
ENSDARG00000094871 ENSDART00000144374 N/A N/A N/A 0.089±0.03 N/A N/A 0.203±0.00 0.163±0.09 0.206±0.00 N/A 0.202±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008294 ENST00000262013 N/A N/A N/A N/A N/A N/A 1.450±0.03 N/A N/A N/A N/A 5.339±0.00 1.935±0.00 6.651±2.11
ENST00000357122 9.241±0.00 3.930±0.00 N/A 7.736±0.00 4.662±0.00 4.834±0.00 1.833±0.00 4.819±0.41 8.728±0.00 4.383±0.00 N/A 6.020±2.46 4.098±0.51 13.406±6.70
ENST00000502329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505173 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.658±0.00 N/A 11.364±1.55 10.355±0.00 44.024±0.00
ENST00000505279 N/A N/A N/A N/A 3.000±0.00 5.329±0.00 2.396±0.00 4.232±0.00 2.320±0.00 6.280±0.00 14.432±9.68 N/A N/A 8.219±0.00
ENST00000506483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510283 N/A N/A N/A 5.293±0.91 N/A N/A 1.029±0.00 N/A 5.876±0.00 N/A N/A N/A N/A N/A
ENST00000510855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514613 N/A N/A 6.174±0.00 N/A N/A N/A 2.372±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000515685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618113 N/A 2.115±0.00 3.789±0.00 4.045±0.00 N/A N/A N/A 1.380±0.00 N/A 3.502±0.00 0.978±0.00 3.205±0.00 1.576±0.00 N/A
ENSG00000141232 ENST00000268957 N/A N/A 3.349±0.00 1.812±0.00 2.602±0.00 2.899±0.00 N/A N/A 3.483±0.00 N/A 18.814±0.00 13.477±7.06 2.714±1.39 12.119±0.00
ENST00000499247 4.490±0.00 N/A N/A 7.767±0.00 4.509±1.58 6.158±0.58 4.854±4.40 18.551±0.00 5.850±3.30 3.362±2.06 16.219±10.49 7.615±6.92 1.606±0.69 9.838±7.67
ENST00000509385 10.988±0.00 6.847±0.00 N/A 15.451±0.00 21.562±0.00 7.420±0.00 11.733±0.00 23.090±0.00 8.198±3.33 4.173±0.00 22.503±2.87 29.931±2.16 4.384±0.00 18.780±4.32
ENSG00000247011 ENST00000501718 N/A 0.029±0.00 N/A 0.085±0.03 0.061±0.00 0.070±0.00 0.009±0.00 0.035±0.01 0.202±0.17 0.104±0.07 N/A 0.327±0.35 N/A 0.020±0.01
ENSG00000249870 ENST00000509833 N/A N/A N/A N/A N/A 0.211±0.00 N/A N/A N/A N/A N/A 0.371±0.00 N/A 0.558±0.49
ENSG00000251665 ENST00000506394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.112±0.00
ENST00000512717 N/A N/A 0.127±0.00 N/A N/A N/A N/A 0.023±0.00 N/A 0.021±0.00 0.020±0.00 N/A N/A N/A

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