C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transducer of ERBB2, 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000049240 tob1a-001 ENSDARG00000032619 7955 - 3:17914556-17918223 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000049240
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000049240 55.088±19.56 122.262±56.54 45.272±21.14 20.157±0.00 252.065±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X3 CIL_0004X3_0001 CGP 3:17826640-17918223
CIL_0004X0 CIL_0004X0_0002 CGP 3:17914556-18102544

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0009953 IMP dorsal/ventral pattern formation
GO:0016055 IGI Wnt receptor signaling pathway
GO:0030509 IDA BMP signaling pathway
GO:0060070 IGI canonical Wnt receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041589 Tob1-001 protein_coding Mus_musculus 0 455
ENST00000268957 TOB1-002 protein_coding Homo_sapiens 0 425
ENST00000499247 TOB1-001 protein_coding Homo_sapiens 0 425

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