C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 38, member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036748 Slc38a8-001 ENSMUSG00000034224 10090 - 8:119479602-119501698 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000036748
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000036748 0.014±0.00 0.050±0.02 0.018±0.00 0.028±0.01 0.049±0.03 0.037±0.02 0.028±0.02 0.019±0.01 0.013±0.01 0.013±0.00 0.452±0.26 0.137±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Y4 CIL_0004Y4_0003 CGP 8:119446719-119501698
CIL_00057A CIL_00057A_0003 CGP 8:119479602-119558761

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006814 IEA sodium ion transport
GO:0006865 IEA amino acid transport
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299709 SLC38A8-001 protein_coding Homo_sapiens 0 1184
ENST00000568003 SLC38A8-004 retained_intron Homo_sapiens 0 296
ENST00000568178 SLC38A8-002 protein_coding Homo_sapiens 0 743

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