C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004ZC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172062-ENSG00000249437 CGP 9606 5:70925030-71025114
GeneTranscriptPositionBiotype
ENSG00000249437 (NAIP)
NLR family, apoptosis inhibitory protein 		ENST00000194097 (NAIP-201) 70968483-71020910 protein_coding
ENST00000315147 (NAIP-004) 70968483-70987150 retained_intron
ENST00000447012 (NAIP-008) 71002930-71011772 nonsense_mediated_decay
ENST00000503719 (NAIP-202) 70968483-71024373 protein_coding
ENST00000508426 (NAIP-006) 70970050-71020710 protein_coding
ENST00000508794 (NAIP-003) 70998121-71020774 retained_intron
ENST00000514857 (NAIP-007) 70970247-70976228 protein_coding
ENST00000517649 (NAIP-001) 70968483-71024687 protein_coding
ENST00000519014 (NAIP-005) 71003598-71020730 nonsense_mediated_decay
ENST00000523981 (NAIP-002) 70969820-71025114 protein_coding
CIL_0004ZC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021645-ENSMUSG00000078945 CGP 10090 13:100124852-100202092
GeneTranscriptPositionBiotype
ENSMUSG00000021645 (Smn1)
survival motor neuron 1 		ENSMUST00000022147 (Smn1-001) 100124852-100137690 protein_coding
ENSMUST00000091321 (Smn1-003) 100124894-100137480 protein_coding
ENSMUST00000125572 (Smn1-007) 100126125-100126935 retained_intron
ENSMUST00000134514 (Smn1-002) 100124858-100127142 retained_intron
ENSMUST00000135355 (Smn1-010) 100135393-100137450 retained_intron
ENSMUST00000140745 (Smn1-006) 100124858-100127812 nonsense_mediated_decay
ENSMUST00000143937 (Smn1-008) 100124924-100131174 protein_coding
ENSMUST00000147306 (Smn1-005) 100131003-100137690 retained_intron
ENSMUST00000151389 (Smn1-009) 100127875-100128630 retained_intron
ENSMUSG00000078945 (Naip2)
NLR family, apoptosis inhibitory protein 2 		ENSMUST00000067975 (Naip2-201) 100144063-100197147 protein_coding
ENSMUST00000117913 (Naip2-001) 100144063-100202092 protein_coding
ENSMUST00000167986 (Naip2-002) 100144231-100201961 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004ZC_0001ENSG00000249437ENST00000194097ENST00000315147ENST00000447012ENST00000503719ENST00000508426ENST00000508794ENST00000514857ENST00000517649ENST00000519014ENST00000523981CIL_0004ZC_0002ENSMUSG00000021645ENSMUST00000022147ENSMUST00000091321ENSMUST00000125572ENSMUST00000134514ENSMUST00000135355ENSMUST00000140745ENSMUST00000143937ENSMUST00000147306ENSMUST00000151389ENSMUSG00000078945ENSMUST00000067975ENSMUST00000117913ENSMUST00000167986
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004ZC_0001ENSG00000249437ENST00000194097ENST00000315147ENST00000447012ENST00000508426ENST00000519014CIL_0004ZC_0002ENSMUSG00000021645ENSMUST00000022147ENSMUST00000134514ENSMUST00000143937ENSMUST00000147306ENSMUSG00000078945ENSMUST00000067975ENSMUST00000117913ENSMUST00000167986
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000249437 ENST00000194097 N/A N/A N/A N/A 0.591±0.00 N/A 0.102±0.00 0.189±0.00 N/A N/A N/A N/A 0.952±0.18 N/A
ENST00000315147 0.629±0.00 2.448±0.00 0.914±0.00 0.834±0.06 1.082±0.22 0.836±0.71 0.361±0.23 0.504±0.03 0.664±0.51 1.447±0.55 0.137±0.03 1.204±0.88 0.165±0.00 1.682±0.81
ENST00000447012 1.123±0.00 3.369±0.00 4.274±0.00 3.301±0.00 3.213±0.84 2.415±1.29 1.387±0.00 1.752±0.00 N/A 1.535±0.00 N/A 1.587±0.00 N/A 1.837±0.00
ENST00000503719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.600±0.00 N/A N/A
ENST00000508794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519014 1.052±0.00 N/A N/A 1.417±0.00 1.555±0.00 2.152±0.00 0.411±0.00 N/A 1.990±0.00 2.585±0.00 0.136±0.00 0.521±0.00 3.743±1.92 2.844±0.00
ENST00000523981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021645 ENSMUST00000022147 4.578±1.32 2.882±0.61 16.002±1.37 14.896±7.00 2.756±1.02 4.057±0.83 2.121±0.79 4.439±0.96 10.050±9.25 5.116±0.99 4.334±0.62 8.918±2.61 18.238±6.67 6.043±1.63
ENSMUST00000091321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134514 N/A N/A N/A 6.971±0.00 3.078±0.00 N/A 1.947±0.00 2.419±0.00 2.330±0.38 5.909±0.00 N/A N/A 14.350±8.01 N/A
ENSMUST00000135355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143937 N/A N/A N/A 6.702±0.00 N/A N/A 1.597±0.28 N/A N/A N/A 1.677±0.10 11.995±1.07 18.376±9.39 8.695±0.00
ENSMUST00000147306 N/A 3.595±0.94 N/A N/A 3.602±0.00 1.845±0.00 N/A N/A N/A 4.034±0.22 N/A 3.675±1.01 N/A N/A
ENSMUST00000151389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078945 ENSMUST00000067975 0.735±0.47 0.522±0.19 1.050±0.02 0.056±0.00 0.870±0.37 8.926±3.51 0.181±0.05 0.460±0.11 0.890±0.57 0.658±0.34 0.078±0.06 0.667±0.25 0.399±0.25 0.060±0.02
ENSMUST00000117913 0.492±0.00 N/A N/A 0.055±0.01 0.647±0.00 2.417±0.01 N/A 0.380±0.13 0.268±0.00 0.646±0.18 N/A 0.318±0.05 0.208±0.09 0.031±0.00
ENSMUST00000167986 0.151±0.06 0.540±0.03 N/A 0.021±0.00 0.386±0.00 2.670±0.00 0.074±0.00 0.457±0.21 0.265±0.07 0.194±0.00 0.039±0.00 0.538±0.29 0.163±0.09 0.025±0.00

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